Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5386 ATGCTTTCCTACATTATACACATCAACCTAACAATGCAAGATAAATTCATCATCTTTTCTTTGTTTCTTGTTCTTTTTTGTCCATTCCAAGTGATCTCACTCTACCAACCTTTCAATGAAGATATGCTAGGGTTGATTGTGTTCAAATCAGGTCTAGAAGATCCAAAAAACAAACTTTCTTCTTGGAATGAAGATGATTATAGTCCTTGCAATTGGGAAGGTGTAAAATGTGACCCTTCAACAAATAGAGTTTCTTCTCTTGTTCTTGATGGATTCTCTCTTTCGGGCCATATCGGTAAGAGTCTTATGAAGTTGCAGTTTCTTCAAATTCTTTCACTTTCTAGGAACAACTTCACAGGGAAAATAAACCATGATTTTCTTGTTACACTTTGGAATCTAAAAGTTGTTGATTTGAGTGAAAATAGTCTCTCCGGAGCAATTCCAGACGAGCTTTTTCGACAATGTTGGTCGTTAAGAGTTTTATCGTTTGCGAAGAACAATCTATCGGGTAAGATTCCCGAGTCTTTGAGTTCGTGCTACTCGTTAGCAAGTTTGAACTTTTCGACTAATCAGTTGAATGGTGAATTGCATTCGGGAATGTGGTTTTTGAAGGAACTTCAATCGCTTGATCTATCGAATAATTTTCTTAAAGGAGAAATTCCCGAAGGAGTTCAAAATCTATATGATTTGAGAGAGTTAAGGCTAGGGAGGAATTTTTTCACCGGTAGGATTCCGGAGAATATAGGAAACTGTTTGCTTTTGAAGATGATCGATTTCGGTGATAATCTTCTAACCGATGAAATTCCAGAGTCGATACAAAGACTCACTTCATGCACATTGTTGAATTTGCAAGTGAATTTTCTCAATGGAAGCATTCCACATTGGATCGGCGAATTGAACAATCTTGAGATATTGGATCTTTCGTCAAATAGATTTTCGGGTTCGATTCCATCTGCAATCGGAGGTCTTAGAAGTTTGCAAGTTTTGAATTTTTCTACAAACAATATCTTTGGTTCTATTCCAGTGAGTATAAAAGAGCTTAAATCTTTGTATGTTCTTGACTTAAGTGATAACAAGCTTAATGGAAGCATTCCTTTAGAAATAGAAGGAGCAACTTCACTTCTTGAATTGAAGCTTCAAGGGAATTTGTTAGGTGGAAGAATTCCAATTCAAATTGCAAAATGTTCAGCTCTAAAATCTTTGAATCTTGCACACAACAATCTTATTGGTTCAATCCCTACATCAATTGCAAACCTAACAAATCTTCAATATGCAGATTTGTCATGGAACAAACTCTCTGGAACTTTACCGAAAAAGCTCACAAATCTTACACATCTTTCCTCATTCAATGTTTCATATAACCATCTTCAAGGTGAACTACCAATTGGTGGATTCTTCAACACAATCACTCCCTCATTTGTTCATGGAAATCCATTGTTGTGTGGTTCTGTTGTTAACCACTCATGCGATCGATCTTATCATCCGAAACCTATTGTTTTGAACCCTAATTCAAATTACAGCAATTCAAGAACTTCATTACAAAACCATCATCATAAGATAATGCTTAGTATATCTGTCTTTATTGCTATTGGTGCGGCAGTTTCTATTGTTGTTGGTGTTGTTGCTGTTACCATTTTGAATATTCATGTTAGGACTTCAGTTTCGCATTCTGGTTATCCATTTGGATTATCTGGTGGTGAGGATAATAGTTTTTCGCCCGAAAAAGATCCGAAATGCGGAAAGTTTGTGATGCTTAATGGCGACATTGTTGAGTTTTCCAATGAGGTGAGTAGTCTTCTTAAAGAAGGTAATGAAATTGGCCGCGGTGGATTTGGAGTTGTTTATTGTGTTGTTCTTCGAGATCAGAATTTCGTTGCGATCAAGAAGCTTATAGGTTCGAGTTTGACAAAATCACAAGAAGATTTCGAGAGAGAAGTTCAAAAGCTTGGTAACGTTAAGCATCAAAATCTCGTGGCACTTGAAGGTTATTATTGGAATTCATCATTTCAGCTTATAATTTATGAGTATTTTTCTAGAGGGAGTTTGCATAAGCTTCTACATGATGATGATCAAAGAAAAATTGTGTTTTCTTGGAGAGCAAGGTTCAAGGTTATTTTAGGAATAGCAAAAGGTTTGGCCTATTTACATCAAATGAACATAATCCATTATAACCTAAAATCTACTAATGTTTTTATCGATACTTGTGATGAACCGAAAATCGGAGATTTCGGTTTGGTGAATCTATTACCAATTCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCGCTAGGATACACGGCTCCTGAGTTTGCGTGTCGCACGGTTAACATTACTGAAAAATGCGACGTATATGGTTTTGGAATTTTGGTTCTAGAAATCGTGAGCGGAAAAAGACCCGTGGAATATATGGAGGACGACGTCATTGTTCTATGTGATATGGTGAGAAGTTCGTTGGAGGATGGGAAAGTTGAACAATGTATCGATGAGAAACTTGTAGGTTATTTTTCGCCCGAGGAGGCGATTCCTATGATTAAATTGGGATTAGTTTGCGCATCGCAAGTACCTTCGAGTCGTCCTGATATGGCTGATGTTGTTAACATATTAGAGACGATTCAATGCTCTTCGGAAGGACAACAAGAGGAAATCCAATGA 2658 0.3679 MLSYIIHINLTMQDKFIIFSLFLVLFCPFQVISLYQPFNEDMLGLIVFKSGLEDPKNKLSSWNEDDYSPCNWEGVKCDPSTNRVSSLVLDGFSLSGHIGKSLMKLQFLQILSLSRNNFTGKINHDFLVTLWNLKVVDLSENSLSGAIPDELFRQCWSLRVLSFAKNNLSGKIPESLSSCYSLASLNFSTNQLNGELHSGMWFLKELQSLDLSNNFLKGEIPEGVQNLYDLRELRLGRNFFTGRIPENIGNCLLLKMIDFGDNLLTDEIPESIQRLTSCTLLNLQVNFLNGSIPHWIGELNNLEILDLSSNRFSGSIPSAIGGLRSLQVLNFSTNNIFGSIPVSIKELKSLYVLDLSDNKLNGSIPLEIEGATSLLELKLQGNLLGGRIPIQIAKCSALKSLNLAHNNLIGSIPTSIANLTNLQYADLSWNKLSGTLPKKLTNLTHLSSFNVSYNHLQGELPIGGFFNTITPSFVHGNPLLCGSVVNHSCDRSYHPKPIVLNPNSNYSNSRTSLQNHHHKIMLSISVFIAIGAAVSIVVGVVAVTILNIHVRTSVSHSGYPFGLSGGEDNSFSPEKDPKCGKFVMLNGDIVEFSNEVSSLLKEGNEIGRGGFGVVYCVVLRDQNFVAIKKLIGSSLTKSQEDFEREVQKLGNVKHQNLVALEGYYWNSSFQLIIYEYFSRGSLHKLLHDDDQRKIVFSWRARFKVILGIAKGLAYLHQMNIIHYNLKSTNVFIDTCDEPKIGDFGLVNLLPILDHCVLSSKIQSALGYTAPEFACRTVNITEKCDVYGFGILVLEIVSGKRPVEYMEDDVIVLCDMVRSSLEDGKVEQCIDEKLVGYFSPEEAIPMIKLGLVCASQVPSSRPDMADVVNILETIQCSSEGQQEEIQ* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5386 885 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 321 - -
Psa7g5386 885 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 302 875 - -
Psa7g5386 885 Pfam Leucine Rich Repeat 206 227 IPR001611 GO:0005515
Psa7g5386 885 Pfam Leucine Rich Repeat 398 419 IPR001611 GO:0005515
Psa7g5386 885 Pfam Leucine Rich Repeat 301 323 IPR001611 GO:0005515
Psa7g5386 885 SMART LRR_typ_2 227 251 IPR003591 -
Psa7g5386 885 SMART LRR_typ_2 347 371 IPR003591 -
Psa7g5386 885 SMART LRR_typ_2 443 467 IPR003591 -
Psa7g5386 885 SMART LRR_typ_2 299 323 IPR003591 -
Psa7g5386 885 SMART LRR_typ_2 130 154 IPR003591 -
Psa7g5386 885 SMART LRR_typ_2 203 226 IPR003591 -
Psa7g5386 885 Gene3D Ribonuclease Inhibitor 249 489 IPR032675 -
Psa7g5386 885 Pfam Leucine rich repeat 132 192 IPR001611 GO:0005515
Psa7g5386 885 SUPERFAMILY L domain-like 229 482 - -
Psa7g5386 885 SUPERFAMILY L domain-like 41 276 - -
Psa7g5386 885 SMART LRR_sd22_2 347 368 - -
Psa7g5386 885 SMART LRR_sd22_2 203 226 - -
Psa7g5386 885 SMART LRR_sd22_2 299 325 - -
Psa7g5386 885 SMART LRR_sd22_2 419 445 - -
Psa7g5386 885 Gene3D Phosphorylase Kinase; domain 1 588 676 - -
Psa7g5386 885 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 321 - -
Psa7g5386 885 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 302 875 - -
Psa7g5386 885 SUPERFAMILY Protein kinase-like (PK-like) 600 872 IPR011009 -
Psa7g5386 885 ProSitePatterns Protein kinases ATP-binding region signature. 606 629 IPR017441 GO:0005524
Psa7g5386 885 Pfam Protein kinase domain 602 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5386 885 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Psa7g5386 885 PRINTS Leucine-rich repeat signature 206 219 - -
Psa7g5386 885 PRINTS Leucine-rich repeat signature 347 360 - -
Psa7g5386 885 Gene3D Ribonuclease Inhibitor 201 248 IPR032675 -
Psa7g5386 885 Gene3D Ribonuclease Inhibitor 38 200 IPR032675 -
Psa7g5386 885 ProSiteProfiles Protein kinase domain profile. 600 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5386 885 Gene3D Transferase(Phosphotransferase) domain 1 677 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5386 Psa-Chr7 464864110 464868036 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5386 24 877 Receptor kinase-like Gene Family AT5G01890 50.208 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Psa7g5386 Pkinase 4.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5386 - - gmx:100791204 1020.38