Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5352 ATGGTTCGCTCTAGTAGCATCATCCTCTTTACCCACCTTGCTAGTCGATCACTCTTTCACGCCAATGATTCAGTATATGAAGTAGCTTTCCAAAGGGGTTATAGGACATTGAATTTAGGATCATTTAGTTCATCTAGAGTTATTGGTAGTAATGCACCAAATGTTGCTGTTAGAGGCGGTGTTAATTTGAAGAACTGGTTGCCATGGGGAGCAGCTAATTCATATTTGGGGGCGTCTAGATCAATTCACGGCTCAGCATCATTGGCAAGGGACTATTATGATGTTCTTGGTGTGAGTAAAGATGCAAGCTCTTCTGAAATAAAGAAAGCTTATTACGGGCTTGCAAAGAAGCTTCATCCAGACACAAATAAAGATGATCCCGAAGCTGAAAAGAAGTTTCAAGAAGTCACAGTGGCATATGAGGTTTTGAAGGATGAGGAAAAGCGTCAACAGTATGATCAGGTTGGACATGATGGCTATGTAAACCAACAAAGCACTGGTTTTGGAGGCGAGGGTGGCTTCAATCCTTTCGAGCATGTGTTCAATGGCTTCAATCCTTTCAACATTTTCCGTCAAAGTGCAGATGTCAAGACTATCATTGAATTATCTTTTACCGAAGCTATCCAAGGGTGCACCAAAACTTTGACATTTCAAACAGATGTACTTTGCAATGCTTGTGGTGGGAGTGGTGTTCCTCCTGGTACAAGACCTGAAACTTGTACGCGATGTAAAGGATCAGGGGTGATATTTGTGCAAACTGGAATATTCAGAATGCAGAGTCCTTGTGGTACCTGCAATGGAACTGGAAGAATTGTATCGAATTTCTGCAAGTCTTGCAAGGGTGCGAAAGTTGTCAAAGGAACAAAGACAGTAAAGTTGGATATTATATCTGGAATCGACAACAATGAGATTCTAAAGGTGTATGGAGGTGGAGGAGCAAATCCTGATGGACATCATTCTGGTGATCTATATGTTACTATCAAGGTTAGGGAAGATCCTGTTTTTCGCAGAGAAGGGTTAGATGTTCATGTGAATGCTGTTTTAAGTTTTACTCAGGCGATTTTGGGGGCAACCATTGAGGTCCCGTCTTTTACTGGAAATGTAATGCTTAAGGTTCCCCCGGGCACCCAACCTGGTCAAAAGGTGGTTTTGAAAAGGAAAGGTATAAGGAAAGGAACAAATACTTTCAAATATGGGGACCAATATGTTCATTTTAATGTCAGCATTCCAACAAGCCTGACAGAGAGACAGCGTGAATTGATACAAGAGTTTGCCAAGGAAGAGCAAGAGGAATCGGATAAACGGAAAGCTGCTTCGGCTTCTAGTTAA 1329 0.4176 MVRSSSIILFTHLASRSLFHANDSVYEVAFQRGYRTLNLGSFSSSRVIGSNAPNVAVRGGVNLKNWLPWGAANSYLGASRSIHGSASLARDYYDVLGVSKDASSSEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVTVAYEVLKDEEKRQQYDQVGHDGYVNQQSTGFGGEGGFNPFEHVFNGFNPFNIFRQSADVKTIIELSFTEAIQGCTKTLTFQTDVLCNACGGSGVPPGTRPETCTRCKGSGVIFVQTGIFRMQSPCGTCNGTGRIVSNFCKSCKGAKVVKGTKTVKLDIISGIDNNEILKVYGGGGANPDGHHSGDLYVTIKVREDPVFRREGLDVHVNAVLSFTQAILGATIEVPSFTGNVMLKVPPGTQPGQKVVLKRKGIRKGTNTFKYGDQYVHFNVSIPTSLTERQRELIQEFAKEEQEESDKRKAASASS* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5352 442 Pfam DnaJ domain 91 153 IPR001623 -
Psa7g5352 442 SUPERFAMILY HSP40/DnaJ peptide-binding domain 334 421 IPR008971 GO:0006457|GO:0051082
Psa7g5352 442 CDD DnaJ_zf 223 283 IPR001305 GO:0031072|GO:0051082
Psa7g5352 442 ProSitePatterns Nt-dnaJ domain signature. 133 152 IPR018253 -
Psa7g5352 442 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 30 440 - -
Psa7g5352 442 SUPERFAMILY Chaperone J-domain 90 190 IPR036869 -
Psa7g5352 442 Gene3D - 196 328 - -
Psa7g5352 442 Pfam DnaJ central domain 223 283 IPR001305 GO:0031072|GO:0051082
Psa7g5352 442 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 210 286 IPR036410 -
Psa7g5352 442 PRINTS DnaJ domain signature 93 111 IPR001623 -
Psa7g5352 442 PRINTS DnaJ domain signature 111 126 IPR001623 -
Psa7g5352 442 PRINTS DnaJ domain signature 128 148 IPR001623 -
Psa7g5352 442 PRINTS DnaJ domain signature 148 167 IPR001623 -
Psa7g5352 442 Gene3D - 330 440 - -
Psa7g5352 442 Gene3D - 215 287 - -
Psa7g5352 442 SMART dnaj_3 90 148 IPR001623 -
Psa7g5352 442 Pfam DnaJ C terminal domain 198 410 IPR002939 -
Psa7g5352 442 Gene3D DnaJ domain 88 195 IPR036869 -
Psa7g5352 442 ProSiteProfiles Zinc finger CR-type profile. 210 288 IPR001305 GO:0031072|GO:0051082
Psa7g5352 442 SUPERFAMILY HSP40/DnaJ peptide-binding domain 191 332 IPR008971 GO:0006457|GO:0051082
Psa7g5352 442 CDD DnaJ_C 194 413 - -
Psa7g5352 442 PANTHER DNAJ-CLASS MOLECULAR CHAPERONE 30 440 - -
Psa7g5352 442 Hamap Chaperone protein DnaJ [dnaJ]. 88 437 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Psa7g5352 442 ProSiteProfiles dnaJ domain profile. 91 156 IPR001623 -
Psa7g5352 442 CDD DnaJ 91 145 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5352 Psa-Chr7 463248904 463255323 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5352 85 153 C2H2 Transcription Factor Family AT1G74250 43.243 3.38e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5352 K03686 - gmx:100799735 661.373