Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5348 ATGGCGAATCACGATGATGATTTCACACACGACGTTTTCCTGAGTTTCAGAGGCAAAACTCGCTATTCCTTCACCGATCATCTCTACCGTTCACTTCTCCGTCACGGAATCAACGTCTTCCGAGACGATCAAAACCTCAAAATCGGCAACGAAATTGGACCTTCACTTCTTCATGCAATCGAAGCTTCTAGAATCTCGATCGTTGTGCTTTGCCGTGACTACGCTTCTTCCACTTGGTGCCTTGACGAACTTGTTAAGATCGTTCACTGTTATTATGAAATGAAAGGTAAAATAGTTTTGGTTGTTTTTTATAAGGTGGAACCTTCAGATGTTAGGCATCAGAGAAATAGTTATCAAGTTGCTATGGTTGAACATGAGAAGAGATTTGGAAGGGAATCGGAGAAGGTGAAAGCGTGGAGATTGGCTTTGAATTCAGTTTGTGCTCTTAGCGGATTGCATTGCAAGGACGATAGTTACGAATCTGAATTTATTGAGAAGATTGTGAGAGACATCTCAGCTAAACTAACTCCAATGCCTTTACATATCAAGCACCTAGTCGGACTCGACTCTCGTTTCGAACAAGGAAGTGCTAAGGTTGAAGGAATAATGCTTCATCCCCCAAAACAAGAAAAAGTAGATCATTGGGCTTGTAATGCCTTTAAGAAGATGAAAAACCTTAGAATTTTAATTGTTAGGAATACATTGTTTTCATTAGGACCTAGTAATCTTCCGAATAGTTTACGGTTACTCAATTGGAAGTGGTACCCATCAAAGAATTTCCCACCAGATTTTTATCCATACAGAATTGTTGACTTCAAGTTACCTCATAGCTCGATGATATTGAAAAAGCCCTTTCAGATTTTTGGGGATTTAACATTCATCAATCTCTCCCATAGTCAATTCATAACTCAAATTCCAGATCTGTCAGGAGCTAAAAACATAAGAGTGCTTACATTTGATAAATGCCATAAACTGGCAAAGTTTGATATATCTGTTGGATTTATGCCTAATCTGGTGTCTTTAAGTGCTTCGGGGTGCACTGAGCTCAAAAGTTTTGTGCCAAAAATGTATTTGCCCTCCCTTCAAGTGCTTTCGCTTAATTTCTGCAAAAAATTTGAACACTTCCCACAAGTAATGCAAAAGATGGATAAGCCATTAAAGATTCACATGATAAGTACCGCCATTAAGGAGTTTCCAAAGTCTATTGGTAACCTTACAGGCCTTGAGTATATAGACATGTCAACTTGCAAAGGGCTCAAAGATCTATCAAGTAGCTTCTTATTGCTTCCAAAACTGATCTCTTTGAAAATTGATGGATGCTCTCAAGTAGGAGAATCATTTCAAAGGTTCAAAGAGCGGCATTCAGTGGCAAACGGCTATCCAAATTTAGAAACACTTCATTTCAGCGAGGCTAATCTATCATTTGAAGATGTTAATGCCATTATTGAAATATTTCCAAAGCTGGAAGACTTGAAAGTTTCGCACAATGGGTTTGTAGCCCTCCCAAGTTGCATCGGCGAATCTATGCACTTGAAAAATCTTGATGTGAGCTTTTGCAGGAATCTTACAGGAGTTCCAGAACTTCCATCAAGTATTCAGAAAATCGATGCAAGACACTGTCAATCCTTAACTTCAGAGGCATCAAGTTTGCTATGGTCAAAGGTTTCACAAGAGATCCAAAGAATACAAGTTGTGATGCCTATGCCGAAAATGGAGATTCCAGAATGGTTTGACTGTGTTTGCACTCAAGAGATTCCACTTTTTTGGGCTCGCCGGAAGTTTCCCGTTGTTGCTTTAGCATTAGTGTTCCAAAAAAAGCCAGACAATTCAGACAATTTTCTTAAAATTGTTGATTATATAAATTTGTTTACTGGAGTCAAAGACTGGCACACTGTTAGCCTTCATTTGTTTATTGATGGCCAAGAAATATGTGGCAGGAATTTCCATTATTTCAATGTTGGGGAAGATCATGTGCTATTGTGTGACCTGCGATTTTTGTTTAATGACGAAGAGTGGCAAGACCTTGATGCAAGTCTTGGAGATGACTGGAAGGCCATTCAGGTCCAATATGATTCGGACTTGATTCTGACCAAGTGGGGAGTTTATGTGTACAAGCAAGAAACAAGCATGGATGATATCCAATTCATACCTCCCAATCGCAGTTCATGTTCCTACATGCCATCGTCATATTTGGTTCCAAAGAGATCACCAGAGCAGCAAATGAAACATGTGCTAGAAAATTTCAATCCAAGAGACATGTTTAGTGAGTATTTACCTCTATCAGAATCAGAAGAAGGTCCAGTAAGGTCTTTAAAAGTGCTTTTGCGGTCTTTGCGGAATGCCAAGGTGGAAGTTATAGAAAAGACTTCTTCCTCTGCCTATGGGGCAAGTCTAAAGCAAGACCATGAAGATTCTGTAGAGCATGTGATTCAAGTATTAGAGATGATAAAAGAGAATTTATCAGAACATTTTGCTGATTTATCTCCTGAAGATCTTCAAATTGCAAGCGGAGTTGCGGAGAGAGTATTGCGGGCACGGGTAGAATTAATGAAAGACGGTAGCTTGGACATTGGTATGCCTATTATTCTAGAATATACTGATGCATTAGGAGCAAAAAACCGACGCTTTTGGGGAATCATGGAGATAAAACTGGGAGATCCATTTTACAAACCAGTGTTGAAGAGGCAAAACCAACTTTCCTGGGGACTTGGGACTAGCAATGAAGCCTCAACGTCTGACCTAAGAGTGATAATTGTTGAATTGAAATGCCAGCCTGCAGGTACAGAGGAAGCTTCAAGCTCTAGCATTGAAGAATCCTTGGAGGAAGGAAACTACAATCCTGAATTGGAAGAGTTAATGAGAAGGATAGAGCAAGATGCTATGGACTTGAATAAATCTTATGGGAAAATGAAGGCATCTATTGTTCAAACTGACGAGTCATTTTCTGAAAATCATCTATTGGAAGCATTAATCTTCAGAAGACTAATAGTTTTGGGAAAATTGACAATGTTTGGATCAGCGACCAAGTTCAAGATCACACCTTATGGGAAGATGAGGGCAGAAGACGAACCTTTCCGCATACTGAGGACATGTTTTTGGGGTTTAATCTTTGTTCTTATTGCCCTAACTATATGGTCATTTCATTTCATTGTATGTGTATGCCTTTACTTTTATAAAATACCAATAATAAGGAAGTTACTAATGTGGGGTTGGTGGCTTGTCAAACAAGTTTGTTCATCTTCTAAAAAATTATACAGCGGAATTGGCATGATTATTACAAGAATAAAGGAAAAGGAATTGTAG 3303 0.3896 MANHDDDFTHDVFLSFRGKTRYSFTDHLYRSLLRHGINVFRDDQNLKIGNEIGPSLLHAIEASRISIVVLCRDYASSTWCLDELVKIVHCYYEMKGKIVLVVFYKVEPSDVRHQRNSYQVAMVEHEKRFGRESEKVKAWRLALNSVCALSGLHCKDDSYESEFIEKIVRDISAKLTPMPLHIKHLVGLDSRFEQGSAKVEGIMLHPPKQEKVDHWACNAFKKMKNLRILIVRNTLFSLGPSNLPNSLRLLNWKWYPSKNFPPDFYPYRIVDFKLPHSSMILKKPFQIFGDLTFINLSHSQFITQIPDLSGAKNIRVLTFDKCHKLAKFDISVGFMPNLVSLSASGCTELKSFVPKMYLPSLQVLSLNFCKKFEHFPQVMQKMDKPLKIHMISTAIKEFPKSIGNLTGLEYIDMSTCKGLKDLSSSFLLLPKLISLKIDGCSQVGESFQRFKERHSVANGYPNLETLHFSEANLSFEDVNAIIEIFPKLEDLKVSHNGFVALPSCIGESMHLKNLDVSFCRNLTGVPELPSSIQKIDARHCQSLTSEASSLLWSKVSQEIQRIQVVMPMPKMEIPEWFDCVCTQEIPLFWARRKFPVVALALVFQKKPDNSDNFLKIVDYINLFTGVKDWHTVSLHLFIDGQEICGRNFHYFNVGEDHVLLCDLRFLFNDEEWQDLDASLGDDWKAIQVQYDSDLILTKWGVYVYKQETSMDDIQFIPPNRSSCSYMPSSYLVPKRSPEQQMKHVLENFNPRDMFSEYLPLSESEEGPVRSLKVLLRSLRNAKVEVIEKTSSSAYGASLKQDHEDSVEHVIQVLEMIKENLSEHFADLSPEDLQIASGVAERVLRARVELMKDGSLDIGMPIILEYTDALGAKNRRFWGIMEIKLGDPFYKPVLKRQNQLSWGLGTSNEASTSDLRVIIVELKCQPAGTEEASSSSIEESLEEGNYNPELEELMRRIEQDAMDLNKSYGKMKASIVQTDESFSENHLLEALIFRRLIVLGKLTMFGSATKFKITPYGKMRAEDEPFRILRTCFWGLIFVLIALTIWSFHFIVCVCLYFYKIPIIRKLLMWGWWLVKQVCSSSKKLYSGIGMIITRIKEKEL* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5348 1100 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 208 755 IPR044974 GO:0006952
Psa7g5348 1100 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 200 IPR044974 GO:0006952
Psa7g5348 1100 Coils Coil 946 966 - -
Psa7g5348 1100 Pfam TIR domain 10 181 IPR000157 GO:0007165
Psa7g5348 1100 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 151 IPR035897 -
Psa7g5348 1100 SUPERFAMILY L domain-like 211 577 - -
Psa7g5348 1100 Gene3D - 5 182 IPR035897 -
Psa7g5348 1100 Gene3D Ribonuclease Inhibitor 389 563 IPR032675 -
Psa7g5348 1100 Gene3D Ribonuclease Inhibitor 215 388 IPR032675 -
Psa7g5348 1100 ProSiteProfiles TIR domain profile. 8 175 IPR000157 GO:0007165
Psa7g5348 1100 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 208 755 - -
Psa7g5348 1100 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 200 - -
Psa7g5348 1100 SMART till_3 9 149 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5348 Psa-Chr7 463191870 463198060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5348 181 452 WRKY Transcription Factor Family AT4G12020 31.834 1.44e-25 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5348 - - mtr:MTR_4g023040 1283.09