Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5332 ATGGATGTTGTCAAAATCCTCTCCACTGATACAATCAAAGCACTAAAATCCAGTGATAAAGAAATCGATTTAACTCCATGGGATCTCCAGTATTTTTCTGGTACACCCAACAAAAAAGGCCTTCTTTATCACCATTCATTAGTATCAAACCAAATTCAACAACTCAAACACTCTTTATCCTCTGCCCTTGAAATTTTTCAACCTCTTGCAGGTCGTCTCAAAATAACAGAACACAAAGACAATACCATCTCATGTTCCCTTATTTGCAACAATGCAGGTGCGCTCTTCAGTCATGCATTTGTAGAGAATACCAGTGTTGCTGACATCCTAGAACCCACCTACGTTCCTTCGATCGTGGCTTCATTTTTCCCTTCTGTCGGAGTTAGGAACTATGAAGGCGCGTCACAACCATTGTTGGCTGTTCAAGTCACGGAGCTGGTCGATGGCATCTTCATTGGTTGCACGTTTAACCATGTGGTTGTGGACGGAAGTTCCATCTGGCATTTCATCAATTCATGGGCTGAAATTTCACGTAGTTCTTGTCATCATCAAATATCCAAACTTCCAATATTGGAACGTTGGTTTCCGGACGGTGTTCAACATCCCATTAAATTTTCTTTTACAATGGAGACGCAAAAGAGTCACTCTGATGGGTCGAGTTCTTCGTCGTCTGACGAAGAACTCGATCTATCAGAGAGAATATTCCATTTCACAAAGGAGAAAATCTTGCAAGTGAAATCGAATATTAATGCAAAAATTGATAGTACCGTTAAAATATCTTCTCTTCAAGCTCTTTTAACTCATGTTTGGTGCTCATTCGTTCGCTCCAAACAATTTGATCCAGAAGAAGAAACTCATAACATATGTTTGATAGGGGTTGGACCAAGAATCGTTCCACCGTTGCCGGAAGGTTATTTTGGAAATTCAATTATAGGTTGCATAGTTACAATGAAAGCTGGAGATTTGTTGAAGGAAGATGGTGTTTGTAACGGTGCTTGGGAGATGAACAAGTTAATTGCTTCACACTCTAACGAGAAGATAAAGAATAAATACGAGTCTTGGTTGAAAAATCCAAATATTATTAGGCCTAGTAGCAAGCCGAATAATAATTTCATACTCATAAGCAGTTCTCCACGGTTTGATGTTTATGGTAATGATTTTGGATGGGGAAAACCAGTGGCAGTTCGGAGTTCAAATAAATTAAATGGAGTTGTTAGTGTGTTTGCTGGAATAGAAGAAGGTAGTATTGATCTTCAACTACGTCTTCCTCACAATATTCTAGAGGCTATGGGAAATGATCTTTAG 1305 0.3908 MDVVKILSTDTIKALKSSDKEIDLTPWDLQYFSGTPNKKGLLYHHSLVSNQIQQLKHSLSSALEIFQPLAGRLKITEHKDNTISCSLICNNAGALFSHAFVENTSVADILEPTYVPSIVASFFPSVGVRNYEGASQPLLAVQVTELVDGIFIGCTFNHVVVDGSSIWHFINSWAEISRSSCHHQISKLPILERWFPDGVQHPIKFSFTMETQKSHSDGSSSSSSDEELDLSERIFHFTKEKILQVKSNINAKIDSTVKISSLQALLTHVWCSFVRSKQFDPEEETHNICLIGVGPRIVPPLPEGYFGNSIIGCIVTMKAGDLLKEDGVCNGAWEMNKLIASHSNEKIKNKYESWLKNPNIIRPSSKPNNNFILISSSPRFDVYGNDFGWGKPVAVRSSNKLNGVVSVFAGIEEGSIDLQLRLPHNILEAMGNDL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5332 434 Pfam Transferase family 4 430 - -
Psa7g5332 434 Gene3D - 227 433 IPR023213 -
Psa7g5332 434 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 433 - -
Psa7g5332 434 Gene3D - 3 202 IPR023213 -
Psa7g5332 434 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5332 Psa-Chr7 462736906 462738219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5332 53 393 Monolignol Biosynthesis Gene Families AT5G48930 28.045 5.99e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5332 - - mtr:MTR_4g022760 523.857