Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5290 ATGGCACAAAAACATATTCTCATATCACTAGCTATTTTTCTCTCACTCCTCTTTGAGTCCTCCTTGGCCAAACATAATTCTCAAACAATAACCTACATAGAGTCCTCTTGCAATGGTACCCTCTACCCTAATCTATGCATTCGTTGCCTTAACAAATTCTCACATTCAACCATAAATGGTCCTCAACACTTAGCCCAACTTGCCTTATCCGTAAGCCTCTCTAGAGCCCTACAAACAAGAGTATACCTTTTGAATGTAGCCAAGGAACTCAAAACAATTGATCATAACAACAAAAGAATGTTCCTAACAGTGCAAGATTGCGTGAATCAAATCAACGATAGTGTAGACCAACTTACCCAAGCCATCAAAGAACTTAAAAGGTTGAATCAATTCAACACCATCATCAATGACAAAGTGTTGTGGCACATAAGTAATGTTGAGACATGGGTTAGCACTGCCTTAACTGATGCTAGTAGCTGTGTGCAATCGTTCCCTGGTCATAGAATGAGTAAAAGGGTTGCGACAATTAAAGTTAAGGCAAAGAATGTTGCAGAAGTTACTAGTAATGCACTTGCTTTGTTTCAGAGATATGCTTCTAGGTACAAACTTGCAGCAGCTGGAACATCCAAGAAGCCTTGA 639 0.3944 MAQKHILISLAIFLSLLFESSLAKHNSQTITYIESSCNGTLYPNLCIRCLNKFSHSTINGPQHLAQLALSVSLSRALQTRVYLLNVAKELKTIDHNNKRMFLTVQDCVNQINDSVDQLTQAIKELKRLNQFNTIINDKVLWHISNVETWVSTALTDASSCVQSFPGHRMSKRVATIKVKAKNVAEVTSNALALFQRYASRYKLAAAGTSKKP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5290 212 PANTHER BNAANNG18590D PROTEIN 6 201 - -
Psa7g5290 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 196 IPR035513 -
Psa7g5290 212 SMART PMEI_2 28 193 IPR006501 GO:0004857
Psa7g5290 212 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 196 IPR006501 GO:0004857
Psa7g5290 212 Coils Coil 108 128 - -
Psa7g5290 212 Pfam Plant invertase/pectin methylesterase inhibitor 32 193 IPR006501 GO:0004857
Psa7g5290 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 201 - -
Psa7g5290 212 CDD PMEI-like_3 35 199 - -
Psa7g5290 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 197 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5290 Psa-Chr7 460833993 460834631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5290 19 194 Carbohydrate Esterase AT5G53370 27.869 2.80e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5290 - - mtr:MTR_4g025590 328.946