LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g5270	ATGTTAGGAGGACCATCATGGAAAGTGAAACTAGGAAGGAGAGACTCAAAGACAGCGAGTCTTGCCGATGCGAATGCGAACATCCCCGGACCATCTTTCAGCCATTCTCAACTCATCGAAAACTTCGAAAACCATGGCCTAAACGAAAAAGACCTCGTTGCTCTTTCTGGCGCACACACTATTGGATTTTCGCGTTGTCTTTTATTCAGGGATCGGATCTACAACGACAACAACATCAATTCCAACTTCGCGAAAGAGCTTCAAAATATTTGTCCTAGAAACGGAGGAGACTCTAACCTCGCACCTTTGGATCGTGTTACACCCGCGAAATTTGATGTGGTTTATTTCGCGAATTTGATTGAAAAGAAAGGTGTTCTTCATTCTGATCAGGTATTGCTGAATGGTGGTTTTAGTGGTGCGTTGGTTAGAAAATATAGTTATGATACTAGAGCTTTCTATAAGGATTTTGCAAAATCTATGATTAAGATGGGAAATATTAAGCCACTTGTTGGAAATCAAGGTGAAGTTCGTTACAACTGCAGGAAAGCCAATTAA	555	0.4108	MLGGPSWKVKLGRRDSKTASLADANANIPGPSFSHSQLIENFENHGLNEKDLVALSGAHTIGFSRCLLFRDRIYNDNNINSNFAKELQNICPRNGGDSNLAPLDRVTPAKFDVVYFANLIEKKGVLHSDQVLLNGGFSGALVRKYSYDTRAFYKDFAKSMIKMGNIKPLVGNQGEVRYNCRKAN*	185

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g5270	184	PANTHER	PEROXIDASE 72-RELATED	2	183	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa7g5270	184	SUPERFAMILY	Heme-dependent peroxidases	2	184	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Psa7g5270	184	Gene3D	-	1	184	-	-
	Psa7g5270	184	ProSitePatterns	Peroxidases proximal heme-ligand signature.	51	61	IPR019793	-
	Psa7g5270	184	PRINTS	Haem peroxidase superfamily signature	3	15	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa7g5270	184	PRINTS	Haem peroxidase superfamily signature	51	66	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa7g5270	184	PRINTS	Haem peroxidase superfamily signature	104	119	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa7g5270	184	Gene3D	Peroxidase, domain 2	29	163	-	-
	Psa7g5270	184	Pfam	Peroxidase	2	146	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa7g5270	184	PRINTS	Plant peroxidase signature	3	18	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa7g5270	184	PRINTS	Plant peroxidase signature	50	62	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa7g5270	184	PRINTS	Plant peroxidase signature	102	117	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa7g5270	184	PRINTS	Plant peroxidase signature	118	135	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa7g5270	184	PRINTS	Plant peroxidase signature	158	171	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Psa7g5270	184	ProSiteProfiles	Plant heme peroxidase family profile.	1	184	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Psa7g5270	184	PANTHER	PEROXIDASE	2	183	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g5270	Psa-Chr7	459910258	459921487	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa7g5270	2	184	Peroxidase	AT5G05340	57.297	4.44e-72	219

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa7g5270	K00430		-	gmx:100812820	269.24

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa7g5270	7	459910258	459921487	Psa7g5270	7	459910258	459921487	ECH