Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5269 GCAGCTACACAGTTGAATTCGGATGATGATCCACGGGTTGAATCAACTACCACCGCAGCACAGTTGAGCTTGCATGCTCTCTCTGGTGACCACGCTGCTGACACCTTTCGGGTAGTGGGCCGAATCGGGCCACAAACAGTCCATGTGCTTGTGGATGGAGGAAGCACGCACAATTTTGTGCAAGAGACTATCGCTAAGACTTTGGGCTTGACTCTTGACCCAATTGATCCATTTAGGGTATTAGTGGGTAGTGGCCAAGAATTGCATTGCACTCATGTGTGTCCTGGGGTGTCTATTGTAATTCAGGATCACACTTTCTCAGTGGACTTGTACGTATTGGGGCTACGAGGTGCTGATATGGTTTTAGGGGCACAGTGGCTTAAACAACTTGGGCCGGTGCTGATGAATTACAATAATCTCACCATGTGTTTCTTTCATAACAACTCCTGTGTTGAACTACAAGGCCTCGCACCCACCCCCACCATGGGCTTGCATTCATTTCACAAATTAACCCGTCACAATCCTGAGGCCCAACTATTCTCCTTACGTATTTCTGGACTTTTAACCACAGATAATCCACCCAATCAAACTGACTCACCTAACACATCCCTATCTCTCCTTCCTCCCCAATTCCAAACCCTAATCACTCATCATGCCAAACTATTTGCAGAACCATCTTCTCTCCCACCCCCACGCACCACTGACCATACAATTCCCCTCATTCCACAATCAACTCCTGTCAATGTGCGTCCTTATCGTTACCCCAATTCCCAGAAGTTGGAAATCGAAGCTCAGGCACTTGCTTCTGCTCCAGTCTTGTCTCTGCCAGATTTTGGGAAGCCCTTTATAGTTCAAACCGATGCTTCGGGGTATGCCATGGGAGCTGTTTTGTTGCAAGATGACCATCCCATCGCCTACTTCACAGGAATCACTCCTTATCAGGTTGTCTATGGTAAACCTCCTCCTACTATTCCTAGCTATGTTGCTGGTTCCTCCACTGTTGATGCTAGTAATGATTTATTATTGACTAGAGAAGAAATACTGGAGATGTTGAAAAAGAATCTGGAAAAAGCTCAACTTAGAATGAAATCTATAGCCGATGGGAAGCGTAGAGAGTTGCACTTTGACGTTGATAATTGGTTACCCCCAGATTCAATTGATAACAGTCCTGTTGTTTCTCCTCTTGTTATTTTGGACACACGTATCGTTGACACTGCTGGTGTGCCTTGTAAACAGTGTCCCGGAGATATTTGTAGTTATAGGTGTACTGTAGCGAATAGTGGTAATGGAAAAAAAAACCCTTATGAACATGAAGGATTCTTATACGGCATAATCTCAGCATCAAGTGTAATTCCTTCAGCAACTACTTTTGTGTCTTCTAACATACCTGATCCTTTTGGTAAGTTGAGTTCTACTTTTTATGAAACAAGGTGTCCTCTTGCTTTGGCGACAATTAAGGCAACAATAACCACTGCTGTATTGAATGATCGTCGATTGGGCGCGTCTTTGCTCCGTCTACATTTTCATGACTGCTTTGTTCAACTTGGTGGACCTTTTTGGCTAGTTCGTCTGGGAAGAAGAGACTCTACAACTGCAAATTTGAATACTGCTAATTCAGATTTACCATCTCCACTTCTTGACCTAAAGGGCCTTATTGCTGCTTTCGGTAAAAAGGGTTTCTCAGCTGATGAAATGGTTGCTTTATCAGGTGCTCACACAATAGGCAAATCAAAATGCTCAGCCTACCGATCAAGGATTTACAACGAAAGCAACGTCGAAATTAATTACAGAAAATCATTGCAAGAAACTTGTCCAAGGACTGGTGGTGATGACTACTTATCTCCTTTAGACACCACAACTCCAGACATATTTGATAATGCTTTTTACAAAGACATATCGTACTATAAGGGCCTTTTGCATTCTGATCAACAACTCTTCAATGGTGGTTCTGGTTCAACTGATTACAAAGTTTTAGCTTATGCCAAAGATGCAACACTCTTCGGGTTGGATTTCGCTAATGCCATGATCAAGATGGGAAATCTCAGCCCTCTAACAGGATACCAGGGCCAGATCAGAAAATATTGTACGAGTGTGAATTAG 2100 0.4343 AATQLNSDDDPRVESTTTAAQLSLHALSGDHAADTFRVVGRIGPQTVHVLVDGGSTHNFVQETIAKTLGLTLDPIDPFRVLVGSGQELHCTHVCPGVSIVIQDHTFSVDLYVLGLRGADMVLGAQWLKQLGPVLMNYNNLTMCFFHNNSCVELQGLAPTPTMGLHSFHKLTRHNPEAQLFSLRISGLLTTDNPPNQTDSPNTSLSLLPPQFQTLITHHAKLFAEPSSLPPPRTTDHTIPLIPQSTPVNVRPYRYPNSQKLEIEAQALASAPVLSLPDFGKPFIVQTDASGYAMGAVLLQDDHPIAYFTGITPYQVVYGKPPPTIPSYVAGSSTVDASNDLLLTREEILEMLKKNLEKAQLRMKSIADGKRRELHFDVDNWLPPDSIDNSPVVSPLVILDTRIVDTAGVPCKQCPGDICSYRCTVANSGNGKKNPYEHEGFLYGIISASSVIPSATTFVSSNIPDPFGKLSSTFYETRCPLALATIKATITTAVLNDRRLGASLLRLHFHDCFVQLGGPFWLVRLGRRDSTTANLNTANSDLPSPLLDLKGLIAAFGKKGFSADEMVALSGAHTIGKSKCSAYRSRIYNESNVEINYRKSLQETCPRTGGDDYLSPLDTTTPDIFDNAFYKDISYYKGLLHSDQQLFNGGSGSTDYKVLAYAKDATLFGLDFANAMIKMGNLSPLTGYQGQIRKYCTSVN* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5269 699 ProSitePatterns Peroxidases proximal heme-ligand signature. 564 574 IPR019793 -
Psa7g5269 699 Pfam Retroviral aspartyl protease 47 130 - -
Psa7g5269 699 CDD retropepsin_like 38 128 - -
Psa7g5269 699 Pfam RNase H-like domain found in reverse transcriptase 265 307 IPR041577 -
Psa7g5269 699 ProSiteProfiles Plant heme peroxidase family profile. 501 699 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g5269 699 Coils Coil 341 368 - -
Psa7g5269 699 PRINTS Haem peroxidase superfamily signature 500 514 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g5269 699 PRINTS Haem peroxidase superfamily signature 617 632 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g5269 699 Gene3D - 469 514 - -
Psa7g5269 699 Gene3D Acid Proteases 24 152 IPR021109 -
Psa7g5269 699 Gene3D - 515 695 - -
Psa7g5269 699 SUPERFAMILY DNA/RNA polymerases 260 308 IPR043502 -
Psa7g5269 699 PANTHER PEROXIDASE 72-RELATED 460 512 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g5269 699 PANTHER PEROXIDASE 72-RELATED 513 699 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g5269 699 Gene3D Peroxidase, domain 2 542 678 - -
Psa7g5269 699 Pfam Peroxidase 515 661 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g5269 699 SUPERFAMILY Acid proteases 34 134 IPR021109 -
Psa7g5269 699 PRINTS Plant peroxidase signature 478 497 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g5269 699 PRINTS Plant peroxidase signature 502 522 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g5269 699 ProSitePatterns Peroxidases active site signature. 500 511 IPR019794 GO:0004601
Psa7g5269 699 PANTHER PEROXIDASE 460 512 - -
Psa7g5269 699 PANTHER PEROXIDASE 513 699 - -
Psa7g5269 699 SUPERFAMILY Heme-dependent peroxidases 469 699 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5269 Psa-Chr7 459885195 459891990 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5269 501 699 Peroxidase AT5G05340 50.249 9.53e-61 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5269 K00430 - sspl:121793461 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5269 7 459885195 459891990 Psa7g5269 7 459885195 459891990 ECH
Psa7g5269 7 459885195 459891990 Psa2g1208 2 91968724 91971384 ECH