Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5267 ATGGAAACTAGTACCAATAAATCTCAAGGTTCATCTTCTTCATCTACAACTACTGATTCAGACATTGATAATAACGATTCAGGTTGTTGTTCCAGCGGTAGTAGTAACGGATCTGATGCTTCAGCAGCAGCTGAGTTGAAGCTGTATAGGGCTTTTATATTCTCTGTGCCTGTTTTCTTCACTTTGATTCTTGTTTTTCTTTTCTATGTTTTCTATTTGAAACCGAGAAGGGTTGATTGGTCTTCTATCAGGATGAGGTCTGTTTCTGTTTTACAACATCATAATCACAACAATGGTATCTCCAGTTCTGATTTGGGGTTGAAGAAGGAATTGAGAGAGATGTTGCCTATTATTGTGTACAACGAAAGCTTTTCTGTCAAAGATACACTATGCTCAGTATGTCTTCTGGACTACCAACCCGATGACAGACTTCAACAGATACCGGTATGCGGCCACACGTTTCACATGAGCTGCATTGATCTTTGGCTCGCCTGCCACAGCACCTGCCCTCTTTGCCGTCTGTCACTACTACCTACTCCGAAATCTTCGACCGAAACATCCAATATGCAGGTAGATAACAGTAATTTCCAAAATGTCTCTGGAGAAGTCGGGATCAGTGCTAACTCACGCGTAGATGTTGAAGAGCAAAATGTGCGAAACAACCAATAG 669 0.4155 METSTNKSQGSSSSSTTTDSDIDNNDSGCCSSGSSNGSDASAAAELKLYRAFIFSVPVFFTLILVFLFYVFYLKPRRVDWSSIRMRSVSVLQHHNHNNGISSSDLGLKKELREMLPIIVYNESFSVKDTLCSVCLLDYQPDDRLQQIPVCGHTFHMSCIDLWLACHSTCPLCRLSLLPTPKSSTETSNMQVDNSNFQNVSGEVGISANSRVDVEEQNVRNNQ* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5267 222 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 20 191 - -
Psa7g5267 222 CDD RING-H2_EL5_like 131 173 - -
Psa7g5267 222 PANTHER RING-H2 FINGER PROTEIN ATL7-LIKE 20 191 - -
Psa7g5267 222 Pfam Ring finger domain 131 173 IPR001841 -
Psa7g5267 222 MobiDBLite consensus disorder prediction 1 25 - -
Psa7g5267 222 ProSiteProfiles Zinc finger RING-type profile. 131 173 IPR001841 -
Psa7g5267 222 SMART ring_2 131 172 IPR001841 -
Psa7g5267 222 SUPERFAMILY RING/U-box 115 179 - -
Psa7g5267 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 178 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5267 Psa-Chr7 459864843 459866179 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5267 38 222 C3H Transcription Factor Family AT4G10150 47.716 7.16e-61 189