Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5255 ATGTGTGATTTGAATTGTAGAGGGTGCAAGTTTTCAGCAGAGGAGGAAAGGGTGGTGATTGAATTACAGGAGCAATTCGGAAACAAATGGGCGAAAATTGCTACGTATTTGGAAGGGAGAACAGACAATGATGTGAAGAACTTTTGGAGTAGCAGGAGAAAAAGGATGGAGAGGTCGTCTCCAAGGACAACATCGCCACCGCGAATTCAGCAGAAAAACAAAGGAAAAGATGTTCCTAATAATCAAGTGAAAATTGAAAAGGTTCCTGAATGTGGTTCTAATCAGCTGGAGGAAAACTTTACTTACCCTACTTCTCGTATGGGAAACAAAGAGGTGTTCAAGATGGTAAACCTACCAGATTTGACAAAACCAAACTACCAAAATATGGAAAGTGACATTAATGGAATTGAGTTTGAGGCTACTCCACTTCACACGGTACCGTCGTTTGAATCTTCGTCAGCGTACAACTTTCCTCTACTCCCAGAACCGCATATGGACTTTCCGCCATTCCCAGAGTGCCATGACCTTGTTCAAGAGCCCTTTGATCCCAGTTTCATGGACATGTTTGAGCAGAAAAAATGTTCAGACTCTGTGTGGAGCCAGAAGCTTGGACTTGAAGAAAATTCTCAGAGTACAAGCTCAAACTGCTTGTTTAAGGATATCTCAAATGAGATTTTTGAATACTTTGCTTAG 693 0.4156 MCDLNCRGCKFSAEEERVVIELQEQFGNKWAKIATYLEGRTDNDVKNFWSSRRKRMERSSPRTTSPPRIQQKNKGKDVPNNQVKIEKVPECGSNQLEENFTYPTSRMGNKEVFKMVNLPDLTKPNYQNMESDINGIEFEATPLHTVPSFESSSAYNFPLLPEPHMDFPPFPECHDLVQEPFDPSFMDMFEQKKCSDSVWSQKLGLEENSQSTSSNCLFKDISNEIFEYFA* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5255 230 Pfam Myb-like DNA-binding domain 10 50 IPR001005 -
Psa7g5255 230 MobiDBLite consensus disorder prediction 62 78 - -
Psa7g5255 230 CDD SANT 10 49 IPR001005 -
Psa7g5255 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 57 IPR017930 -
Psa7g5255 230 SMART sant 7 55 IPR001005 -
Psa7g5255 230 Gene3D - 10 85 - -
Psa7g5255 230 PANTHER MYB TRANSCRIPTION FACTOR 8 229 - -
Psa7g5255 230 ProSiteProfiles Myb-like domain profile. 10 53 IPR001005 -
Psa7g5255 230 SUPERFAMILY Homeodomain-like 5 62 IPR009057 -
Psa7g5255 230 MobiDBLite consensus disorder prediction 49 80 - -
Psa7g5255 230 PANTHER TRANSCRIPTION FACTOR DUO1 8 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5255 Psa-Chr7 459376139 459377160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5255 8 58 MYB Transcription Factor Family AT3G60460 82.353 4.94e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa7g5255 Myb_DNA-binding 1.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5255 K09422 - gmx:121173231 286.96