Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5234 ATGCCCGATTTCTCGGTAGGTCTTAGAAAGCATTCACCTCGACGTGACTCATGCTTGAGGGGTTGTGTACATGTTTGGTCTCTCGATATTGGGAAAATATTTCCCCTACCTGATTCATGCTTGAAGAGTTGTGTACATGTCCAATCTCTTGGTAGGTCTCAAGAAAGCATTTCTCCTTATGCGGCCCATGCTTGGTGGAACGGCTGTCGAACCACGCTCGAATCGGTCTGGACGAAATCAGAAACACTTTCTTCGTCTCCGCTAAATAGCTTATATGAGTCAGAATCCGTTGACACAGAATTCAGAACTGATAGAGTTCTACTCCCAAATGAAACATCATTCGATGAAATGGTTTCTTTGTCCATTTCTTCTTGTCCTTGCAACAAAACCTCAAACAACAACATAGATATTGTTATTGATGTTGACAAGAATTCCCTACCTAGAAAAGATGATAAACTTGAAGAGTACAATTCTTATGTTTCTTTCTCAAAGCTACAACTTCCTCCTATCATCACAAAACCACAAATCAAAAAAGAACATAAACCCATCAAAGAACAACAACAAATCAAGAACATGAACATGAACACGAACAAGAAGAAGAACAAGATTGGTTCAGTAAATTCTCCAGGAATGAAGCTTCGAATAAAATCTCCGAGAATCGCAACTAAGAAACTTCAGTTATATCAGAGCCGGAAAAGCGTAACAACGACAGCTTCCTCCGGCGGATACCACCGGAGAAGAAGCTTCTCCGGTAGTGTTGCAATAGTGAAATCATCTTTTAATCCTCAAAAGGATTTCAGAGAGTCAATGGTGGAGATGATTGTGGAGAATAACATAAGAGAATCAAAGGATTTGGAAGATCTTCTTGCTTGTTATCTTTCTCTGAATTCAGATGAGTATCATCATCTTATTATCAAGGTGTTCAAGCAAATATGGTTTGATTTCACTGAAAACAGGGTAGACAAATATAACTAG 975 0.3908 MPDFSVGLRKHSPRRDSCLRGCVHVWSLDIGKIFPLPDSCLKSCVHVQSLGRSQESISPYAAHAWWNGCRTTLESVWTKSETLSSSPLNSLYESESVDTEFRTDRVLLPNETSFDEMVSLSISSCPCNKTSNNNIDIVIDVDKNSLPRKDDKLEEYNSYVSFSKLQLPPIITKPQIKKEHKPIKEQQQIKNMNMNTNKKKNKIGSVNSPGMKLRIKSPRIATKKLQLYQSRKSVTTTASSGGYHRRRSFSGSVAIVKSSFNPQKDFRESMVEMIVENNIRESKDLEDLLACYLSLNSDEYHHLIIKVFKQIWFDFTENRVDKYN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5234 324 Pfam Transcriptional repressor, ovate 259 314 IPR006458 -
Psa7g5234 324 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 253 315 IPR006458 -
Psa7g5234 324 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 197 318 - -
Psa7g5234 324 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 78 176 - -
Psa7g5234 324 ProSiteProfiles OVATE domain profile. 255 314 IPR006458 -
Psa7g5234 324 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 197 318 IPR038933 GO:0045892
Psa7g5234 324 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 78 176 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5234 Psa-Chr7 457995938 457999251 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa7g5234 Ovate 2.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5234 - - cam:101506553 314.694