Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5224 ATGCCAAGTCCAAGAGCCAATGCTAGTGCTCTCATTACCCTTTTCAAAAAATACAATCTTTCTGTCAAAGATCTTGTAGCGCTTTCAGGATCTCACTCTATCGGTCAAGGTCGTTGTTTTTCGATCATGTTTAGGCTGTACAATCAATCCGGAAGCGGTAAACCTGATCCGGCAATTGATCCTCACTTCAGAGCCGAGCTTGACAAGCTATGTCCGCTTAATGTTGATCAAAATAAGACGGGAAACCTTGATGCGACTCCTGTGATATTCGATAACCAGTATTTCAAGGACTTGGTTGGTGGAAGAGGGTTTTTGAACTCTGATCAAACACTTTTCACTTTCACTCAGACGCGGGGTTTTGTGAAGCTTTATAGTGAAGATCAGAGTAAGTTTTTCAAAGATTTTGCGGAAGGAATGGTGAAAATGGGTGACTTGCAGTCCGGTCGACCTGGCGAGGTCAGGAAGAATTGCAGAGTCGTCAATCCTCGTCCTGCTCATTTCCTGATTGAAAACAACTTGCAGGATAGTGATCTACCAATGTAA 543 0.4328 MPSPRANASALITLFKKYNLSVKDLVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPAIDPHFRAELDKLCPLNVDQNKTGNLDATPVIFDNQYFKDLVGGRGFLNSDQTLFTFTQTRGFVKLYSEDQSKFFKDFAEGMVKMGDLQSGRPGEVRKNCRVVNPRPAHFLIENNLQDSDLPM* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5224 180 Gene3D Peroxidase, domain 2 2 145 - -
Psa7g5224 180 Pfam Peroxidase 2 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g5224 180 PANTHER PEROXIDASE 17 1 162 - -
Psa7g5224 180 SUPERFAMILY Heme-dependent peroxidases 1 162 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa7g5224 180 PANTHER PEROXIDASE 72-RELATED 1 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g5224 180 Gene3D - 1 161 - -
Psa7g5224 180 PRINTS Haem peroxidase superfamily signature 24 39 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g5224 180 PRINTS Haem peroxidase superfamily signature 83 98 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g5224 180 PRINTS Plant peroxidase signature 23 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g5224 180 PRINTS Plant peroxidase signature 81 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g5224 180 PRINTS Plant peroxidase signature 97 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g5224 180 PRINTS Plant peroxidase signature 137 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g5224 180 ProSitePatterns Peroxidases proximal heme-ligand signature. 24 34 IPR019793 -
Psa7g5224 180 ProSiteProfiles Plant heme peroxidase family profile. 1 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5224 Psa-Chr7 457419140 457420234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5224 1 169 Peroxidase AT2G22420 75.740 1.90e-94 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5224 K00430 - gmx:100793330 281.567