Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5223 ATGGCTAAAAGGAAGAAAGAGCAAGATGATGATGATGACAATGTCTCTCTGTCACATAATAAGAAACCTCGTTGTGTCTGGTCTCCTCACCTTCATGCAAAGTTTCTCCATGCTGTTCATTTACTTGGCTTACACGAGGCTGTTCCTAGAAAAATTGTTGCTTTGATGAATGTTGATGGAATTACCAGGGAACATGTTGCAAGCCATCTCCAGAAATATAGACTCAGTAAGAAAAAGGCTATCCATATCCATCAACAAGATGACACACTTCCTTCAACCATGATTCTGAACCCTACTCAATCTCAACAAATCTCCTTTACCATTCATCCACAATCCTACAAATCTCAAACCTCGTTTACCATTCATCCACAATCTCAATCTCAAACCTCCTTTACCATTCATCCACAATCCTACAACTTTCCTGTAAACCAAACCTCAACTTTACTTCTCCCTAACATGAGTGGAGTCGGCCCTTCAACACTAATTCGGCCTATTCAATATCAAAGCTCAAGTTTATTTCCAACTGTTCTTAACCAATCTGCGACACCGTTCGACTTCCATGATAGTATGGCTGCTAACTGCCCTTCATTGCTCCAAATGAATTCACATGATCTTGTTGGATCTGATTCTTCTTCAAAAAGCACAAGCATTTGGGATTATGATTGGCATACAAATTACATGAAAAGTGAACCTCAGTTGCTTCAATTTCTTATTTGCCGTATTGGAGTCTGA 732 0.3948 MAKRKKEQDDDDDNVSLSHNKKPRCVWSPHLHAKFLHAVHLLGLHEAVPRKIVALMNVDGITREHVASHLQKYRLSKKKAIHIHQQDDTLPSTMILNPTQSQQISFTIHPQSYKSQTSFTIHPQSQSQTSFTIHPQSYNFPVNQTSTLLLPNMSGVGPSTLIRPIQYQSSSLFPTVLNQSATPFDFHDSMAANCPSLLQMNSHDLVGSDSSSKSTSIWDYDWHTNYMKSEPQLLQFLICRIGV* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5223 243 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 210 - -
Psa7g5223 243 SUPERFAMILY Homeodomain-like 20 79 IPR009057 -
Psa7g5223 243 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 76 IPR006447 GO:0003677
Psa7g5223 243 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 210 IPR045279 GO:0009736
Psa7g5223 243 Gene3D - 18 80 - -
Psa7g5223 243 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 78 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5223 Psa-Chr7 457401257 457402388 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5223 3 95 Response Regulator Gene Family AT3G16857 46.875 1.86e-21 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa7g5223 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5223 - K14491 egt:105971538 100.908