Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5218 ATGGAAGATAAAGTTGACAACAAACGCAAAGCTATAGTGGCACCTAAAGATGATAATGGTCATAATCAGGATCTTCCAGCTCCCTCCAGAAAAGTAAAAGTACTTATTGTGGACAATGATCCTCGCACTCTAAGGATTCATGAAAACCTATTGAAATCACTTGGTGTGGAAACTCGTACTGTCAAAGATGGAAGAGAAGCCATAAACACGACTGCTTGGAATGATTATTCTCTTCCAGCCTATGACCTAATTCTCATTGGTAGACAGTTACCTTTGATAAATGGGATTGAGGTGACGAAGAGACTGCGAGCTATAGGGTACCCTAGCAGGATTGTTGGAGTGACACGTTCTCTAACAGAAGCTGAACGGGAAGAGTTTCTGAGTGCAGGGGTAGATGATATAGTTGATTATGAGAAGCCAATGTCCATGGAAACGGTTAAGATGCTACTTGCAGCAACTCCCCGTCCCCGAGTGTGGAGGGAAAAAGTTATTTATGATGATGATGTTAATGGTAATAGTTCTGGTTCTACTTCAGGTTCTAGAAAAGTTTCTAGAAAAGATTAA 564 0.4096 MEDKVDNKRKAIVAPKDDNGHNQDLPAPSRKVKVLIVDNDPRTLRIHENLLKSLGVETRTVKDGREAINTTAWNDYSLPAYDLILIGRQLPLINGIEVTKRLRAIGYPSRIVGVTRSLTEAEREEFLSAGVDDIVDYEKPMSMETVKMLLAATPRPRVWREKVIYDDDVNGNSSGSTSGSRKVSRKD* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5218 187 CDD REC_hyHK_CKI1_RcsC-like 34 150 - -
Psa7g5218 187 MobiDBLite consensus disorder prediction 1 25 - -
Psa7g5218 187 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 151 - -
Psa7g5218 187 SMART REC_2 32 150 IPR001789 GO:0000160
Psa7g5218 187 SUPERFAMILY CheY-like 31 160 IPR011006 -
Psa7g5218 187 ProSiteProfiles Response regulatory domain profile. 33 152 IPR001789 GO:0000160
Psa7g5218 187 Gene3D - 22 154 - -
Psa7g5218 187 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 18 151 - -
Psa7g5218 187 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Psa7g5218 187 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5218 Psa-Chr7 457351835 457352981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5218 32 142 Response Regulator Gene Family AT3G04280 38.393 6.16e-18 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa7g5218 Response_reg 1.5e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5218 - K07658 cam:101493171 125.561