Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5215 ATGGCTGCGATGATTAACAACAGAATGGGTAAAAGGAAGAAAGAGCAAGATGATGATGATGATGATGATGATGATGATGATGACAATGTCTCTTTGTCACATAGTAAGAAGCCACGTCTGGTCTGGACTCCTCATCTGCATTCAAAGTTTCTCCATGCTCTTCATTTACTTGGCTTACACGAGGCTGTTCCTAGAAAAATTGTTGCTTTGATGAATGTTGATGGAATTACCAGGGAACATGTTGCGAGCCATCTCCAGAAATATAGACTCAGTAAGAAAAAGGCTATCCATATCCATCAACAAGATGACACACTTCCTTCAACCATGATTCTGAACCCTACTCAATCTCAACAAACCTCCTTTACCATTCATCCACAATCTCAATCTCAAACCTCATTTACCATTCATCCACAAACCTACAACTTTCCTGTAAACCAAACCTCAACTTTACTCCTCCCTAACATGAGTGGAGTCGGCCCTTCAACACTAATTCGGCCTATTCAATATCAAACCTCAAGTTTATTTCCAACTGTTCTTAACCAATCTGCGACACCGTTCGACTTCCATGATAGTATGGCTGCTAACTTCCCTTCATTGCTCCAAATGAATTCACATGATCTTGTTGGATCTGATTCTTCTTCAAAAAGCACAAGCATTTGGGATTATGATTGGCATACAAATTACATGAAAAGTGAACCTCAGTTGCTTCAATTTACCATTATTTGCCGGTATTGGAGTCTGACAAAACAAGTGAAATTGCAGACACACAATGTAGAGCCGTTTATTGTTGGATCTGCTGCTTCTTTGGAAGACACAAACATCCAGGATTATAATTTCTGTTATGATAATAGTCCAGTTGCCTTTTCGGTTGAAGAAACAAATTCTAAAACTTCAGACTGGGGATGTCTAGAACAAGAGGATCTCACAAATATGTGGGGAAGCTTAGAACAAGAGGATCTCATGAATGTTTGGAAGTGCTTAGAAGAGGAGGAGGATGTCACAAATGTTATGCAGCCTTTATGTTATGAAGCTCCTCAATAA 1041 0.3939 MAAMINNRMGKRKKEQDDDDDDDDDDDDNVSLSHSKKPRLVWTPHLHSKFLHALHLLGLHEAVPRKIVALMNVDGITREHVASHLQKYRLSKKKAIHIHQQDDTLPSTMILNPTQSQQTSFTIHPQSQSQTSFTIHPQTYNFPVNQTSTLLLPNMSGVGPSTLIRPIQYQTSSLFPTVLNQSATPFDFHDSMAANFPSLLQMNSHDLVGSDSSSKSTSIWDYDWHTNYMKSEPQLLQFTIICRYWSLTKQVKLQTHNVEPFIVGSAASLEDTNIQDYNFCYDNSPVAFSVEETNSKTSDWGCLEQEDLTNMWGSLEQEDLMNVWKCLEEEEDVTNVMQPLCYEAPQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5215 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 93 IPR017930 -
Psa7g5215 346 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 227 - -
Psa7g5215 346 Gene3D - 33 95 - -
Psa7g5215 346 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 227 IPR045279 GO:0009736
Psa7g5215 346 SUPERFAMILY Homeodomain-like 35 94 IPR009057 -
Psa7g5215 346 MobiDBLite consensus disorder prediction 1 32 - -
Psa7g5215 346 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 37 91 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5215 Psa-Chr7 457213183 457214783 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5215 10 108 G2-like Transcription Factor Family AT5G59570 43.434 7.91e-22 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa7g5215 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5215 - K14491 gmx:100776075 95.9005