Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa7g5184 | ATGGCATTTTGGGGAGTTGAAATCAAACCTGGAAAGCCTTTTACTCACCAATACGATGCTTCCAGAGGACGCCTCCACATTTCAATGGCCACTTTGGGACTTGGCACTGCAATTACGAAAAGCACACTGCAATGTAATGTGGGAAACAAAAGCCCTGTTTTTCTTTGCGCTCTTTATCCTGGAAAAACCGAGTCGTTGCAGTTGAATTTGGAGTTTGAAGAGGATGGTAATGTTGTTCTCTCCGTCATTGGCCCTCGGAGTATTCATCTCTGCGGTTATTATCTTGCACGTGGAAACTATGCCAATACTATGGATGAATCGGAATCATATGGAGAAGATATAGCTGATACTGAAACAGAGAGATCCGATCACAGTGATGAAGACGACTACGATGATAGTTTTATTGATGATGGTGGTGATACAGGTTTCCCACAATCTCCTATTTCCAATGAAGAGGAAGCTTCTTCTGATAGCGGTCGAAAAGTTAAAAAAGGAAGCCGAAGAAGGCTGAGGAAGAAGTACCAGTTGGTAGAGTCAGACGACGATGACTGTCGTGAAGAAAAGAAAATTGTCAACGACAACATGCATGTTGAACCTCAGGAAGTTGATGTCGAAGATAGTCTACCAATTTCATCTATTTGCAAGAATAAAGCCTCTGGAAGGGTCTTGGATCAAGAAATGGATGATAATGTTGATAAAGAAACAGTTGATGCTGGCAACAAAGATGGTCAAGAACCTGAGGATAATACTATTCAAACAACGTTGAAAACTGACAATGTTGTTGTGGACAGTCAGACTCATAGGGAAGCTGAACCTTCAGATCAATTGGTAGATCCCTGCCCTGTTCTGGATGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGAAAAGGAAAAAGAAACAAAGAGTTCTGGTAATGGCCATTCCACCGAATTAGGCAGTGCTGTGCAAGATGAGGCAAAAATAAACATGACTCAGGATCTTCTGGCAGGAAATCAACAGAACCAGCAGCAAGCTGATGATAAGAAAGTTGAAACCACGGATAGAATACTACCTTCCTCACAGGTTGGTCAAGGACAGGATGAAAAACCAAAGAGAAAAAGGAAGGAACGGTCCAAGGATGAGACACTTCTTACTGCTGGTGGCGCTTGTATTAGCAATGTTATTAACCCGCCTCAGGGAAATGAACACAATAGTCAGGACACGGTTAATGGGGATGTTAAGATTTCAGACACTGTTGCATTACCTTCCACTGAAATGGATTCTCAAAAGAAAACAAAGAAGAGAAAGAAAGAGCATTTAAACAAAGCTTCACAGCCTGAAGGTGACAACGGAAATGGTGAAGCCAACAAAGAGAGAGTAGAGTCCGATAGTCTGATTGATAAGTTTTCTGAAAGGAAAGAGCAACATCCAAAGCTTACAGTTGAAAACAATGTTGACCACGATGGAAATCATCAATCTGAAGACAAGAAAGTTAAGAAAAAGAAGAAGAAAAGTAAAAGCCAGGGCATTGAAGTTGTAAATTCTGACGTGCCTGTATCCGTTGAGCCAAGTACTGAGATGGTGAAAGAGGATGGAAATCACATGGAGGATGCAGAACCTTCCCAAGTTAGAACATTGTCAGATGGACTAGTTATTCAAGAGCTAGAGACTGGGAAAACAAAGGGGAAAATTGCTGCATTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGAGTGGTGGTTGAGTCAAATGCTGGCGAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTGATTAAGGGTTGGGATATTGGCCTTGAAGGCATGCAAGTTGGAGAAAAGAGAAGACTTGTGATTCCACCATCATTGTCGTCTAAGAAAGATGGAGACAGTGGCAGCATACCACCAAATTCATGGTTGGTTTATGACTTCGAACTAGTTAAAGTTCACTGA | 1956 | 0.4141 | MAFWGVEIKPGKPFTHQYDASRGRLHISMATLGLGTAITKSTLQCNVGNKSPVFLCALYPGKTESLQLNLEFEEDGNVVLSVIGPRSIHLCGYYLARGNYANTMDESESYGEDIADTETERSDHSDEDDYDDSFIDDGGDTGFPQSPISNEEEASSDSGRKVKKGSRRRLRKKYQLVESDDDDCREEKKIVNDNMHVEPQEVDVEDSLPISSICKNKASGRVLDQEMDDNVDKETVDAGNKDGQEPEDNTIQTTLKTDNVVVDSQTHREAEPSDQLVDPCPVLDVGDIKKSKKKKKEKEKETKSSGNGHSTELGSAVQDEAKINMTQDLLAGNQQNQQQADDKKVETTDRILPSSQVGQGQDEKPKRKRKERSKDETLLTAGGACISNVINPPQGNEHNSQDTVNGDVKISDTVALPSTEMDSQKKTKKRKKEHLNKASQPEGDNGNGEANKERVESDSLIDKFSERKEQHPKLTVENNVDHDGNHQSEDKKVKKKKKKSKSQGIEVVNSDVPVSVEPSTEMVKEDGNHMEDAEPSQVRTLSDGLVIQELETGKTKGKIAALGKKISINYTGKLKENGVVVESNAGEAPFKFRLGKGEVIKGWDIGLEGMQVGEKRRLVIPPSLSSKKDGDSGSIPPNSWLVYDFELVKVH* | 652 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa7g5184 | 651 | MobiDBLite | consensus disorder prediction | 245 | 261 | - | - | |
| Psa7g5184 | 651 | MobiDBLite | consensus disorder prediction | 216 | 512 | - | - | |
| Psa7g5184 | 651 | MobiDBLite | consensus disorder prediction | 146 | 168 | - | - | |
| Psa7g5184 | 651 | MobiDBLite | consensus disorder prediction | 361 | 377 | - | - | |
| Psa7g5184 | 651 | Gene3D | Nucleoplasmin core domain | 1 | 99 | - | - | |
| Psa7g5184 | 651 | MobiDBLite | consensus disorder prediction | 285 | 306 | - | - | |
| Psa7g5184 | 651 | Pfam | Nucleoplasmin-like domain | 3 | 95 | IPR041232 | - | |
| Psa7g5184 | 651 | MobiDBLite | consensus disorder prediction | 221 | 244 | - | - | |
| Psa7g5184 | 651 | SUPERFAMILY | FKBP-like | 523 | 650 | - | - | |
| Psa7g5184 | 651 | MobiDBLite | consensus disorder prediction | 327 | 341 | - | - | |
| Psa7g5184 | 651 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 267 | - | - | |
| Psa7g5184 | 651 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 392 | 651 | - | - | |
| Psa7g5184 | 651 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 563 | 651 | IPR001179 | GO:0003755 | |
| Psa7g5184 | 651 | Gene3D | - | 516 | 651 | IPR046357 | GO:0003755 | |
| Psa7g5184 | 651 | MobiDBLite | consensus disorder prediction | 107 | 129 | - | - | |
| Psa7g5184 | 651 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 559 | 648 | IPR001179 | GO:0003755 | |
| Psa7g5184 | 651 | MobiDBLite | consensus disorder prediction | 387 | 408 | - | - | |
| Psa7g5184 | 651 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 1 | 267 | - | - | |
| Psa7g5184 | 651 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 392 | 651 | - | - | |
| Psa7g5184 | 651 | MobiDBLite | consensus disorder prediction | 447 | 490 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa7g5184 | Psa-Chr7 | 455157697 | 455166558 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa7g5184 | 563 | 648 | Calmodulin-binding Proteins | AT5G48570 | 41.860 | 3.76e-15 | 77.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa7g5184 | K14826 | - | gmx:100798135 | 593.964 |