LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g5173	CTGTAGTGTTGGCTGGCGGTGGTCACTCTGCTAATGGTGCTGTGGCCCAAGGCTCCCAATCTGAAGGGGATTCTAACAACACAACTATATTTGTTGGAGGGCTTGATTCTGAAATCAGCGATGAACAAAGCCACATCCTAGGTGCTGATCTTTTTGAAAGTATTGCAGCTGAAATAATCAGTGCCATGATACTTGGGGGAACAATGGCACAAAGGTGTAAAATCGAAGGCAAGTGCCTAGGTACACGTGAATCTGGAGTAATGGCTCCTATGGAAGATCCTATGGCAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGTTGTTCTGGCATTTGGTCTGTCTACCCGGTGGTTACTTTATGTTGAGCAAGCACCTTCAGCATGGTTCAACTTTGCTTTGTGCGGGTTCTATTCGAATTTTGGGCTACTATACAGGGCAACCCTTACTCGAGCTAAAATTGTTGCTTCTTTTCTGATGTTTGCACAGTGTCTGGTTTTCTTATGGCACTTTTCGAACACATCTGGTGGGTGCCTGTTTATGTTTTCTGCACATGGAACGTGTTTCCGTGAAATTCCAATCGGTAAAGGATGGGCTTTGTTCAACTTGCTGACAGGTAACCATTGTGGCATTGCCAATATATCAGTAGTGTCTTATTTTCGCCTCGCTTGCTATATACGCCAGTTTTATCCTTCTGCTCTTCTGTTAACAGAAAGAATGCTGAGGAGCTATTCAGGATTGAATGGAACAGTGATCGGGAATGGAGGAATAATGATTCGAATGGAACCCTTATGGCGGGCAAGGTTCGGTGGTCACGGATACGGAGGCATGGATATGCTGCCTAGACAGATCAGGTATAGCGATGCAACAACCTGCGCTGCAATTCAAGGGCTTCTAACGGCCATAGCGCGTTGCGTCGCGGCTGCTCCACTGTCCAGTCCTATTAATCTTCAAGCTCCACTCCAACCACTCACACTGAAGAGAACCACAGTCATAGCTTCTGCTTCAAAATCTGGAGGAGGATTATCACTCAATTCGATATTCAAAAGTTGTAAGAATTGTGAAGGCAAAGGTGCTATTCAATGTCCAGGATGCAAGGGAACAGGAAAGAATAAAAAGAATGGAAATATATTTGAACGGTGGAAGTGCTTTGGGTGCCAAGGGTTTGGGCTAATCGGTTGCCCTAACTGTGGAAAGGGAGGGTTGACACCAGAACAAAGAGGAGAAAGATAA	1235	0.4478	VVLAGGGHSANGAVAQGSQSEGDSNNTTIFVGGLDSEISDEQSHILGADLFESIAAEIISAMILGGTMAQRCKIEGKCLGTRESGVMAPMEDPMAILQKGYSVTIVLVVLAFGLSTRWLLYVEQAPSAWFNFALCGFYSNFGLLYRATLTRAKIVASFLMFAQCLVFLWHFSNTSGGCLFMFSAHGTCFREIPIGKGWALFNLLTGNHCGIANISVVSYFRLACYIRQFYPSALLLTERMLRSYSGLNGTVIGNGGIMIRMEPLWRARFGGHGYGGMDMLPRQIRYSDATTCAAIQGLLTAIARCVAAAPLSSPINLQAPLQPLTLKRTTVIASASKSGGGLSLNSIFKSCKNCEGKGAIQCPGCKGTGKNKKNGNIFERWKCFGCQGFGLIGCPNCGKGGLTPEQRGER*	411

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g5173	410	PANTHER	PROTEIN EMBRYO SAC DEVELOPMENT ARREST 3, CHLOROPLASTIC ISOFORM X1	310	410	-	-
	Psa7g5173	410	PANTHER	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	310	410	-	-
	Psa7g5173	410	MobiDBLite	consensus disorder prediction	12	26	-	-
	Psa7g5173	410	MobiDBLite	consensus disorder prediction	1	26	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g5173	Psa-Chr7	454668403	454673978	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa7g5173	4	137	Primary Pumps ATPases	AT1G78920	50.633	1.92e-37	142

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa7g5173	K23025		-	mnt:21396996	142.124