Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5147 ATGTTTGATAAGACTCTAACTTATGTGAAAGCTATGTGGTGTTTTAACTGCTTCGGGTTTCTCAAGAGACGGAACACGCAGAAGGTTAAGCCTGCCATCTACAATAGTAATCTCTCCCAAGAGCTGTTGTTGGATGATGATGATGATGATTTTGATGACGAAGAGTCTTTCTGTAATGACGAGGTTACTAGCACCACCAGTGGAGATGATAGTGAGGAGCAAAGTCGTCCTAAGCGATCGGAGGATATTTTGGTTTTTAGAGTAGAGAATGGGATGATTTGTAGACAGTTTCCTGTTAAAGAGACTGACAAAGTTTTTCGCACAGAGGATGAAAATGGAAACAAGATGATAAATGAGTATGTTCGTGAGTATAAGATTGGTTCGGGTAGCTATGGGAAAGTGTCTCTTCACCGAAGCTCGGCTGATGGAAAACATTATGCAATTAAGGCCTTTCATAAGTCCCATTTACGGAAGCTTCGAGTTGGACCCTCAGAAACTGCCATGACCGATGTTCTACGTGAGGTTTTCATAATGAAAATGATCCAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGACCCAGAATCCGATCACTTCTACATGGTACTTGAATATGTGGAAGACAAATGGGTTTGCGAGGGTTCAGGTCGAGCTTGTAGCTTAGGTGAAGAGACTGCTAGGAGATACTTGCGGGATATTGTTTCTGGATTAATGTATCTCCATGCTCATAATATAGTTCACGGGGATATCAAGCCTGATAATCTGTTGATTACTCGTCATGGTACAGTAAAGATAGGGGATTTCAGTGTCAGCCAGGCTTTTGAGGATGATAATGATGTGCTTCGACGATCACCTGGAACTCCTGTTTTCACTGCACCTGAATGTATTTTAGGTCTTACCTACCGAGGTAAAGCCTCAGACACATGGGCAGTAGGAATTACTTTATACTGTATGATATTGGGCGAATACCCTTTTCTTGGTGACACACTTCAAGATACATATGACAGGATAGTCAATAATCCAATAGTGCTCCCAAAGGATCTGAATCCGCGGTTGAAGAATTTAATCGAAGGACTACTTTCCAAAGACCCAAAGCAAAGGATGGCGTTGGCTGATGTCGCGGCTGATAGCTGGGTCATTGGAAATGATGGGCCAATTCCTGAGTACATGTGTTGGTGTAAAAGGAAGAACATGGAGAGGAAAGACAGTGAATGA 1221 0.421 MFDKTLTYVKAMWCFNCFGFLKRRNTQKVKPAIYNSNLSQELLLDDDDDDFDDEESFCNDEVTSTTSGDDSEEQSRPKRSEDILVFRVENGMICRQFPVKETDKVFRTEDENGNKMINEYVREYKIGSGSYGKVSLHRSSADGKHYAIKAFHKSHLRKLRVGPSETAMTDVLREVFIMKMIQHPNIVNLIEVIDDPESDHFYMVLEYVEDKWVCEGSGRACSLGEETARRYLRDIVSGLMYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQAFEDDNDVLRRSPGTPVFTAPECILGLTYRGKASDTWAVGITLYCMILGEYPFLGDTLQDTYDRIVNNPIVLPKDLNPRLKNLIEGLLSKDPKQRMALADVAADSWVIGNDGPIPEYMCWCKRKNMERKDSE* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5147 406 CDD STKc_LKB1_CaMKK 126 381 - -
Psa7g5147 406 SUPERFAMILY Protein kinase-like (PK-like) 111 393 IPR011009 -
Psa7g5147 406 ProSiteProfiles Protein kinase domain profile. 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5147 406 MobiDBLite consensus disorder prediction 59 80 - -
Psa7g5147 406 SMART serkin_6 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5147 406 Gene3D Phosphorylase Kinase; domain 1 114 216 - -
Psa7g5147 406 Pfam Protein kinase domain 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5147 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Psa7g5147 406 Gene3D Transferase(Phosphotransferase) domain 1 218 389 - -
Psa7g5147 406 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 405 - -
Psa7g5147 406 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 1 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5147 Psa-Chr7 450312128 450315150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5147 115 388 CBL-interacting serine-threonine protein kinases AT5G35410 31.752 3.70e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Psa7g5147 Pkinase 5.1e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5147 K00908 - gmx:100789178 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5147 7 450312128 450315150 Psa7g5147 7 450312128 450315150 ECH