Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5131 ATGGGTCTCACATTATTGGGCATTTGGTCGGTGCAGGGCGTTGAGTCATATGCCTTTGCTCTACACGGGCTATTTGTTGAAGCAAGTAGTAACTGGAGTGGACTCCACTGCAAACAGGTAACTTGTGGGTGTGCAGCTGGAGTTGCTGCTACATTTAGAGCTCTAGTTGGTGGTGTGTTGTTTGTAATGGAAGATATTACATCCTGTGGTCAAGAGGATTATTCGTTTGTAGAGTTATTCCCAATGGTTATTATTGGGGTTATTGGAGGTATACTAGGAGCTTTATTTAACCAACTTACACTTTATATTACTATTTGA 318 0.4151 MGLTLLGIWSVQGVESYAFALHGLFVEASSNWSGLHCKQVTCGCAAGVAATFRALVGGVLFVMEDITSCGQEDYSFVELFPMVIIGVIGGILGALFNQLTLYITI* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5131 105 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 39 68 - -
Psa7g5131 105 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 73 104 - -
Psa7g5131 105 Gene3D Clc chloride channel 69 105 - -
Psa7g5131 105 SUPERFAMILY Clc chloride channel 40 103 IPR014743 -
Psa7g5131 105 Pfam Voltage gated chloride channel 39 67 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Psa7g5131 105 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 73 104 - -
Psa7g5131 105 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 39 68 - -
Psa7g5131 105 Gene3D Clc chloride channel 20 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5131 Psa-Chr7 449483749 449488235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5131 68 104 Ion Channels AT5G26240 75.676 4.46e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5131 K05016 - han:110885750 85.8853