Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5090 ATGGAGCATTTGTTAAGTCTTGTAATATGCACACTGTTGTTAGTAAAATCAACTGAAGGGGTTGTTGTGCCAATCACTTATGTTCAAAGTGCAGTACCAAAAGGAGCTGTTTGGTTGGATGGGAGTCCACCGGCTTACCACTTTGATAAGGGATTTGATGCCGGAATTGATAACTGGATTGTTCGCTTCATGGGAGGAGGATGGTGTAACAATGCCTCTCATTTCCTTGACCGTAGAGACACCCCATTAGGATCGTCCAAGAAAATGGATACAACACTTTCCTTTTCGGTTTCTTTTAGTAATGAAAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGAGGAGGAAGAATATTTGTTGTTGTCATTGAGGATTTACTAGCAAAAGGAATGAAAAATGCTAAAAATGCAATTCTATCTGGATGTTCTGCTGGAGGATTGACCTCTATTTTACAATGTGATCGCTTTAGAACTTTACTTCCTGCAGCAGCTAAAGTTAAATGCGTCTCAGATGTTGGTTATTTTATCAATGTAAAAGCGGTCTCTGGAGCACAACACATTGAACTATTCTACAGCCAAGTCGTTCAAACACATGCATCGACAAAGAATTTGCCTTGA 624 0.3894 MEHLLSLVICTLLLVKSTEGVVVPITYVQSAVPKGAVWLDGSPPAYHFDKGFDAGIDNWIVRFMGGGWCNNASHFLDRRDTPLGSSKKMDTTLSFSVSFSNEKSLIQISTIGTESRGGRIFVVVIEDLLAKGMKNAKNAILSGCSAGGLTSILQCDRFRTLLPAAAKVKCVSDVGYFINVKAVSGAQHIELFYSQVVQTHASTKNLP* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5090 207 PANTHER PECTIN ACETYLESTERASE 3 103 - -
Psa7g5090 207 PANTHER PECTIN ACETYLESTERASE 116 207 - -
Psa7g5090 207 PANTHER NOTUM-RELATED 116 207 IPR004963 GO:0016787
Psa7g5090 207 PANTHER NOTUM-RELATED 3 103 IPR004963 GO:0016787
Psa7g5090 207 Pfam Pectinacetylesterase 116 207 IPR004963 GO:0016787
Psa7g5090 207 Pfam Pectinacetylesterase 17 104 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5090 Psa-Chr7 446803347 446804044 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5090 1 207 Carbohydrate Esterase AT4G19420 45.690 7.03e-68 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5090 K19882 - gmx:100781246 266.544