Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5072 ATGAAGAAGGTACTCGGTTGGTTTTCCCCAAAGGGTTCCCCCAAAAACCGCAACCGGAATCGCAGCACCACCGGCCCCGGCGACAACTCTCCCCGTGTCAAATGGGTTCACCCCGGCGACAACTTTCCCCGTGTCAAATGGGTTCACCCCGGCGACAACTCTCCCCGTGTCAAATGGGTTCACCCCCGGAAACCCACCGCGGATGCCACCACTTCCGCTCCCTCTCCTTCTTCAAGTCCCCTTCCCACTTCCACTCCCGTTCCCGCTTCCGCTTCAGCCTCTACTTCCACAAACTGGGGAAAGAGCGAGAAAGAAGATTATTCTGCTCTTGCAAGAATCGATGAACTTACTGAGGAAATGGAGACTTTAAGCTTAAATTTAGGAGATGTGCCTATACAGAAATTCAGTTTCGTTCAACTTCAGCTCGCAACAGCCAACTTTAGCCCTGATATGTGTGTGGGTCGAGGAGGTTTCGGCCATGTTTACAAAGGGATCCTGGCTCCACAGGAACAAGAAGTAGCTATAAAGTGTCTTGACCCGAAAAGCGATCAAGGAACCCCGGCATTTGTTACTGAGTTGGAGTTACTGAGTAACACAAACCACGAAAACATTGTCCGATTGATTGGATATTGTGCTGAGAATGAGCACAGGATGTTAGTTTATGAGTACATTAGAATGGGATCTTTGGAAGATCATTTACTAAATCGCTACGATGGTGAGCATCTCGGAATTCTGGACTGGGATACAAGACTTAGAATAGCATATGAAATAGCAAAGGGTGTGCTGTATCTTCATAGAATGGAGCCTAATATCCTATATAGGGATATAAAAAGCGCAAACGTTTTGTTAGGGAAAGGTTATACTGTAAAGTTATCTGATTTTGGATGTGCTACAACATTCTCACCTGATGAAGAAGAACTTCATTTTACAAAGGTTGTAGGCACACAGGGATATTTAGATCCAAGGTATTTTGCAACAGGTCATTGTACATTCCAAACAGATGTTTACAGCTTTGGTGTTGTTCTTTTGGAGCTCCTCACTGGTAGAAAAGCTCTTGATGTAAACAGACCACCCGACGATCAGAGTCTCGTTATGTGGGCAGGAAGAGTATTCCATGATAAGACCAGGTTCACAGAAATTGCTGATCCATTGCTAAAAGATAAATTTCATGAGTTCACTTTCAATGCACTTGTTCATATGGCTCGGTATTGTGTTCAGTATGAGCCTAAGTCGAGGCCCCTAATGTGTCATATTGTCGATGTTCTAAGACAAATGAATAAAGTTGCTATTGAACCAGAAAGTCCTAGATTCAGAACGCTAACCCAGAGTCCTACAGTTCCTTCAGCTTCTGCTGCTCCAGTTAAATCGTGTTGA 1374 0.4476 MKKVLGWFSPKGSPKNRNRNRSTTGPGDNSPRVKWVHPGDNFPRVKWVHPGDNSPRVKWVHPRKPTADATTSAPSPSSSPLPTSTPVPASASASTSTNWGKSEKEDYSALARIDELTEEMETLSLNLGDVPIQKFSFVQLQLATANFSPDMCVGRGGFGHVYKGILAPQEQEVAIKCLDPKSDQGTPAFVTELELLSNTNHENIVRLIGYCAENEHRMLVYEYIRMGSLEDHLLNRYDGEHLGILDWDTRLRIAYEIAKGVLYLHRMEPNILYRDIKSANVLLGKGYTVKLSDFGCATTFSPDEEELHFTKVVGTQGYLDPRYFATGHCTFQTDVYSFGVVLLELLTGRKALDVNRPPDDQSLVMWAGRVFHDKTRFTEIADPLLKDKFHEFTFNALVHMARYCVQYEPKSRPLMCHIVDVLRQMNKVAIEPESPRFRTLTQSPTVPSASAAPVKSC* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5072 457 PANTHER OS01G0750732 PROTEIN 76 427 - -
Psa7g5072 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Psa7g5072 457 ProSiteProfiles Protein kinase domain profile. 147 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5072 457 Gene3D Transferase(Phosphotransferase) domain 1 224 436 - -
Psa7g5072 457 MobiDBLite consensus disorder prediction 1 106 - -
Psa7g5072 457 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
Psa7g5072 457 MobiDBLite consensus disorder prediction 68 103 - -
Psa7g5072 457 Pfam Protein kinase domain 152 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5072 457 Gene3D Phosphorylase Kinase; domain 1 108 223 - -
Psa7g5072 457 SMART serkin_6 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5072 457 SUPERFAMILY Protein kinase-like (PK-like) 131 448 IPR011009 -
Psa7g5072 457 MobiDBLite consensus disorder prediction 13 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5072 Psa-Chr7 445755961 445757929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5072 129 422 Glycoside Hydrolase AT3G07070 47.119 1.46e-85 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Psa7g5072 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5072 - - cam:101494202 298.516