Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5068 ATGAAACAGAAAGTGAGAGTGATGGAACCATTTACAAGAGATCATCGTGGCTCACTTGAAGTCTTCAATCCATCTTCCTCTGAGAACAATAACGAGAATCCGAATCCGAATTCGAATCCGACTCCAAGTAACTCATGGAACACTTGGACAGGTTCACGCGCTATCGAGACTCCACCAACGCGCGATTCTATTATTTCCGATGAAGTTCCCGCCGCCACGTCCTGGATGGCGCTGAAAGAAACCGCGCCTCCGCCAAAATCCGGAGAATCAGGCTCCGCTGCGGAGCAGAGAGCGGCGGAGTGGGGATTAGTGCTGAAAACTGATTCGGAGACGGGAAAGCCACAGGGAGTTGGTGTTCGAGGCTCCGGTGGTGGTAGTGGTTCGAGGAGAGAGTCGAACAACTCGGTGAGAAGCTCCGGTGAGTCTTCCGATGACGGAAGGGAGGGCGGTAGGGGAATACCGAGAGTTTCGGAGGATTTGAGAGATGCTCTATCGGCTTTTCAACAAACTTTTGTTGTTTCGGATGCTACCAAACCCGATTACCCGATTATGTATGCTAGTGCCGGGTTTTTTAATATGACGGGTTATACATCCAAAGAGGTCATAGGAAGAAACTGTCGGTTTATGCAGGGAGCGGATACGGATCCGAATGACGTGGCAAAGATAAGAGAAGCGGTTGCGGCGGGAACGAGTTATTGTGGAAGGTTGCTGAATTACAAGAAAGATGGAACAACGTTCTGGAACCTTCTAACTATTGCTCCTATTAAGGACGAACATGGAAAAATCCTGAAACTTATAGGAATGCAAGTGGAGGTTAGTAAGCATACAGAAGGGACGAAGGAGAAGATGCTGCGTCCCAACGGATTGCCTGAATCGTTGATTCGATATGATGCTCGTCAGAAAGAGAAGGCAAACTCGTCAGTTACTGAGTTGGTGGAGGCGGTGAGCAAAAGACCACGCTCACTCAGTGAATCAGCAAACCGTCTCCCCTTCATCAAAAAGCCAACAAATGGTAGTAATAGCCATGCAACACAAGTACACAAAACACCATCAAATTCTAAATCATCAAGGAGAAAATCTGAGAGCACTTTGCCTTCATTCCGTCGCAAATCACATTCAGGAGGAGACAATTTGAATTCAATGCATCCTATCACTGAGCTCCCAGAAACCAAAATCATCTCGCGCCGCCGCTCTTTCATGGGGTTCATGAGGAAAAGTCTGTCAAATAATGAAAGATTCAATGATGAACATGTTATTGATGGGGATAGCTCTGAGGATGATGATGATAGGTTTGATAGTTTTGATGACAAAAATATTACTCAAAAGAGGGAAAAGAGAAAAGGTCTTGATCTTGCTACCACACTTGAACGTATCGAGAAAAACTTTGTCATTACTGATCCAAGGCTCCCTGATAACCCTATTATCTTTGCCTCTGATAGCTTCTTAGAGCTTACCGAGTATTCTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGACCTGAAACTGATCCTGCAACAGTGAAAAAAATTAGATATGCTATTGACAATCAAACAGAAGTTACTGTGCAGCTCATTAATTATACCAAGACTGGTAAAAAGTTCTGGAACCTGTTTCATTTGCAGCCAATGCGTGATCAGAAGGGGGAGGTGCAGTATTTTATTGGAGTTCAACTTGATGGTAGTCAACATGTTGAGCCTCTTCACAACCGCATTGCAGAAGATACAGCAAAGGAGGGAGAAAATTTGGTAAAGAAAACTGCAGAAAATGTTGATGATGCATTGAGAGAACTTCCAGATGCTAACATGAAACCAGAAGATCTATGGATGAATCATTCGAAAATGGTTCACCCTAAACCTCATAGGAGGGAAGATGCTGCTTGGAGAGCTATTCAGAAGATCATGGAGAGTGGAGAGCAGATAGGCTTGAAGCATTTTAAGCCAATTAAACCTTTAGGCTCAGGAGACACTGGCAGTGTTCATCTGGTGGAGCTATGTGGAACTGATCATCAATTTGCGATGAAAGCTATGGACAAGGGTGTTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTAGACATGTTGGACCACCCTTTTCTTCCCGCATTATATGCTTCTTTTCAGACCAAAACACATATTTGTTTGATAACTGATTACTGTCCTGGAGGAGAACTATTTATGCTGCTCGACCGCCAGCCAGCAAAGGTTCTCAAGGAAGATGCAGTGAGGTTTTATGCCACTGAAGTAGTTGTTGCATTGGAATATCTTCATTGTCAAGGGATAATATATAGGGATTTGAAGCCAGAAAATGTGCTACTACAGAGCACTGGACATGTGTCTCTAACAGATTTCGATTTATCATGTTTAACATCTTGCAAACCACAGCTTTTAGTTCCAAGTACAAATGACAAGAAGAAAGGACAACATGGTCCAATATTTATGGCTGAACCAATGCGAGCATCGAATTCTTTTGTTGGCACAGAAGAGTACATAGCTCCGGAAATTATAACAGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTAGGAATTCTTCTGTATGAAATGTTTTATGGATATACACCATTCAGGGGAAAGAACCGGCAAAGAACATTTGCGAATATTCTCCACAAGGATCTTAAATTTCCCAAAAGTAAACAGGTAAGTCTCGGTGCAAAACAGCTCATTTATTACTTGTTGCAAAGAGATCCAACTAGCAGGTTGGGCTCAAAGGGAGGAGCAAATGATATTAAAAACCATTCCTTCTTCAAGGGTATCAACTGGGCCCTAGTTAGATGCACGAAACCGCCGGAGCTTGATGCTCCTCTTTTTGATACAAACAAAGAGGAAAAGGAAAAGGAAAAGGAAGACAAATATGTAGATAATGGACAAGAGGATATGAGTGTCTTCTGA 2940 0.434 MKQKVRVMEPFTRDHRGSLEVFNPSSSENNNENPNPNSNPTPSNSWNTWTGSRAIETPPTRDSIISDEVPAATSWMALKETAPPPKSGESGSAAEQRAAEWGLVLKTDSETGKPQGVGVRGSGGGSGSRRESNNSVRSSGESSDDGREGGRGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEVIGRNCRFMQGADTDPNDVAKIREAVAAGTSYCGRLLNYKKDGTTFWNLLTIAPIKDEHGKILKLIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDARQKEKANSSVTELVEAVSKRPRSLSESANRLPFIKKPTNGSNSHATQVHKTPSNSKSSRRKSESTLPSFRRKSHSGGDNLNSMHPITELPETKIISRRRSFMGFMRKSLSNNERFNDEHVIDGDSSEDDDDRFDSFDDKNITQKREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVKKIRYAIDNQTEVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAEDTAKEGENLVKKTAENVDDALRELPDANMKPEDLWMNHSKMVHPKPHRREDAAWRAIQKIMESGEQIGLKHFKPIKPLGSGDTGSVHLVELCGTDHQFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFMLLDRQPAKVLKEDAVRFYATEVVVALEYLHCQGIIYRDLKPENVLLQSTGHVSLTDFDLSCLTSCKPQLLVPSTNDKKKGQHGPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMFYGYTPFRGKNRQRTFANILHKDLKFPKSKQVSLGAKQLIYYLLQRDPTSRLGSKGGANDIKNHSFFKGINWALVRCTKPPELDAPLFDTNKEEKEKEKEDKYVDNGQEDMSVF* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5068 979 ProSiteProfiles PAS repeat profile. 447 520 IPR000014 -
Psa7g5068 979 SUPERFAMILY Protein kinase-like (PK-like) 631 951 IPR011009 -
Psa7g5068 979 MobiDBLite consensus disorder prediction 305 389 - -
Psa7g5068 979 CDD PAS 183 272 IPR000014 -
Psa7g5068 979 SMART pac_2 233 275 IPR001610 -
Psa7g5068 979 SMART pac_2 524 566 IPR001610 -
Psa7g5068 979 TIGRFAM sensory_box: PAS domain S-box protein 472 562 IPR000014 -
Psa7g5068 979 TIGRFAM sensory_box: PAS domain S-box protein 183 276 IPR000014 -
Psa7g5068 979 MobiDBLite consensus disorder prediction 19 59 - -
Psa7g5068 979 CDD PAS 462 562 IPR000014 -
Psa7g5068 979 SMART serkin_6 648 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5068 979 MobiDBLite consensus disorder prediction 951 972 - -
Psa7g5068 979 Pfam Protein kinase domain 650 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5068 979 ProSitePatterns Protein kinases ATP-binding region signature. 654 677 IPR017441 GO:0005524
Psa7g5068 979 MobiDBLite consensus disorder prediction 126 140 - -
Psa7g5068 979 Gene3D Phosphorylase Kinase; domain 1 647 731 - -
Psa7g5068 979 Pfam PAS domain 470 562 IPR000014 -
Psa7g5068 979 Pfam PAS domain 177 273 IPR000014 -
Psa7g5068 979 Coils Coil 579 599 - -
Psa7g5068 979 MobiDBLite consensus disorder prediction 950 979 - -
Psa7g5068 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Psa7g5068 979 ProSiteProfiles PAC domain profile. 521 575 IPR000700 -
Psa7g5068 979 MobiDBLite consensus disorder prediction 1 151 - -
Psa7g5068 979 SUPERFAMILY PYP-like sensor domain (PAS domain) 176 273 IPR035965 -
Psa7g5068 979 SUPERFAMILY PYP-like sensor domain (PAS domain) 463 562 IPR035965 -
Psa7g5068 979 CDD STKc_phototropin_like 646 951 - -
Psa7g5068 979 MobiDBLite consensus disorder prediction 330 360 - -
Psa7g5068 979 Gene3D PAS domain 436 600 - -
Psa7g5068 979 ProSiteProfiles Protein kinase domain profile. 648 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g5068 979 SMART pas_2 449 518 IPR000014 -
Psa7g5068 979 SMART pas_2 158 227 IPR000014 -
Psa7g5068 979 Gene3D Transferase(Phosphotransferase) domain 1 732 944 - -
Psa7g5068 979 PANTHER PHOTOTROPIN-1 105 973 - -
Psa7g5068 979 ProSiteProfiles PAS repeat profile. 156 226 IPR000014 -
Psa7g5068 979 MobiDBLite consensus disorder prediction 1 16 - -
Psa7g5068 979 Gene3D PAS domain 170 329 - -
Psa7g5068 979 ProSiteProfiles PAC domain profile. 230 284 IPR000700 -
Psa7g5068 979 MobiDBLite consensus disorder prediction 367 384 - -
Psa7g5068 979 PANTHER FLIPPASE KINASE 1-RELATED 105 973 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5068 Psa-Chr7 445082899 445090565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5068 13 976 AGC Kinase Gene Family AT3G45780 69.648 0.0 1342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Psa7g5068 Pkinase 2.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5068 K20715 - gmx:100804524 1415.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5068 7 445082899 445090565 Psa7g5068 7 445082899 445090565 ECH
Psa5g6466 5 546992970 547001760 Psa7g5068 7 445082899 445090565 PCT