LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g5063	ATGGACCTGCGATTCCGGCTGCACGAGGGCGATCCAGCACCCGATTCGGTTTACTCATTAGCAAGTATGGCCGATAACCAACCTCAGTTGAACGATTCTTACTATGGACCTGCGATTCCGGCTGCACGAGGGCGATCCAGCACCCGCCACAACCGTAGCAGTAGCGGTTGTTGTTCTCTCTTTAGTTTTCTATGGAAACTTCTAGTTGTACTTATTGTCCTCTTCGGCCTCATAATCCTTATCTTCTATCTCATTGTTCAACCCCGCGCCTTCAAGTTTTATGTCACGAAAGCCGAATTAACGCAATTCGACTATACCGACAGCACACTCCACTACAATATGGTGCTCAATTTTACGGCCCACAATCCAAACAAAAAACTTGGTATCTATTACGATAAAGTTGAGGCTCAAACGTTTTATGAAGGGGCAAGGTTTGCGAATGTCGATGTGATCACACGCATGAACTCTTTCCGCCAAGACAAGAAAAGCAGTGACCCTATGAGTGGTGTTTTCTTAGGACAACAGTTGTTGGTGCTCCATGATGATCAAGTCTCTGAATTCAACAAAGACAAGAGTGTTGGAGTTTATAATATCAAAGTGAAACTCTACTTTACGATTAGATTCAGACTTGGAGACTCCATATCCAGAAAGTACAAACCTAAGGTCAAGTGCGACCTCACTGTTCCTTTTGGTAACAACAATGGAACTGGATTTACCTTTATTCGACTTATACCCACCAAGTGCGTTATTGAGTTCTAG	759	0.4387	MDLRFRLHEGDPAPDSVYSLASMADNQPQLNDSYYGPAIPAARGRSSTRHNRSSSGCCSLFSFLWKLLVVLIVLFGLIILIFYLIVQPRAFKFYVTKAELTQFDYTDSTLHYNMVLNFTAHNPNKKLGIYYDKVEAQTFYEGARFANVDVITRMNSFRQDKKSSDPMSGVFLGQQLLVLHDDQVSEFNKDKSVGVYNIKVKLYFTIRFRLGDSISRKYKPKVKCDLTVPFGNNNGTGFTFIRLIPTKCVIEF*	253

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g5063	252	PANTHER	OS05G0367900 PROTEIN	45	249	IPR044839	GO:0098542
	Psa7g5063	252	PANTHER	LATE EMBRYOGENESIS ABUNDANT PROTEIN	45	249	-	-
	Psa7g5063	252	Pfam	Late embryogenesis abundant protein	118	224	IPR004864	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g5063	Psa-Chr7	444341557	444342944	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa7g5063	85	237	SNARE and Associated Proteins	AT1G32270	33.333	1.82e-19	84.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa7g5063	-		-	gmx:100807701	285.804