Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5026 ATGACTCCTCAAGAAGAATCTCTTGTTATGGACCTTCACTCTAAATGGGGAAATAGATGGTCAAGAATTGCTAGAAAACTACCGGGAAGAACAGACAACGAGATTAAGAATTATTGGAGGACACACATGAGAAAAAAGAGAGCACAAGAGAAAAAACATGCAGCAACAACAACAACGCCTTCGATTTCATCGCCTGATCAATCTTCTAGTTGTCAATCATCACTATTTTCAAGCAACAATCACGCGGTGGATTCAAACAAGGAGACCGAAGAAGAAGAGAACTACCAAGTTCAAGAAATCGAACAGAGTTACTCAATGGATGATATATGGAGAGACATTGCTATGTCAGAAGAAGATGACATAAACATTTTTCAACAAAGCGTTTATGATGGAACTAGTGAAGAGAATTGCAATAACTTTTGTTCTTCTATAATGCCTTCTGCATCATCATCATCTTCATGGAATTATTCTAATTTAGATCCATTGTGGGTTATGGATGAAGATGAAAGCAAGATGTTGTTCCCTCCTATTGGTGAACAATGTTTCTCCTTTTATGATCAACAAGGGAACACATTTCTAACCGGTTAA 588 0.3724 MTPQEESLVMDLHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKRAQEKKHAATTTTPSISSPDQSSSCQSSLFSSNNHAVDSNKETEEEENYQVQEIEQSYSMDDIWRDIAMSEEDDINIFQQSVYDGTSEENCNNFCSSIMPSASSSSSWNYSNLDPLWVMDEDESKMLFPPIGEQCFSFYDQQGNTFLTG* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5026 195 ProSiteProfiles Myb-like domain profile. 1 43 IPR001005 -
Psa7g5026 195 MobiDBLite consensus disorder prediction 42 95 - -
Psa7g5026 195 SUPERFAMILY Homeodomain-like 2 48 IPR009057 -
Psa7g5026 195 CDD SANT 1 43 IPR001005 -
Psa7g5026 195 SMART sant 1 45 IPR001005 -
Psa7g5026 195 MobiDBLite consensus disorder prediction 54 83 - -
Psa7g5026 195 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 47 IPR017930 -
Psa7g5026 195 Pfam Myb-like DNA-binding domain 2 42 IPR001005 -
Psa7g5026 195 PANTHER TRANSCRIPTION FACTOR MYB48-RELATED 1 176 - -
Psa7g5026 195 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 176 IPR044676 GO:0003700|GO:0006355|GO:0043565
Psa7g5026 195 Gene3D - 2 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5026 Psa-Chr7 441717802 441720115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5026 1 189 MYB Transcription Factor Family AT5G59780 46.316 1.42e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa7g5026 Myb_DNA-binding 4.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5026 K09422 - gmx:100776886 203.371