Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5025 ATGGCGATTTCAAGAATTGCAATTGGAAGTGCTTCTGAGTTTGGCAAAGCTGATGCACTCAAAGCTGCATTAGCTGAGTTCATTTCAATGCTCATTTTTGTCTTTGCAGGAGAAGGCTCTGGCATGGCATATAATAAGCTTACGGATAATGGTGCAGCAACACCAGCTGGGTTGGTAGCTGCATCACTATCACATGCTTTTGCTCTTTTTGTTGCTGTTTCTGTTGGTGCTAACATCTCTGGTGGACATGTTAACCCTGCTGTTACTTTTGGTGCTTTTGTTGGTGGACATATTACACTTGTTAGAGGTCTTTTGTATTGGATTGCTCAGTTGCTTGGTTCTGTTGTTGCTTGTTTGCTTCTTACGATTGCCACTGGTGGAATGGAAACATCTGCATTCTCATTATCTTCAGGAGTAGGAGCAACAAATGCACTTGTGTTTGAGATTGTGATGACTTTTGGTTTGGTTTACACAGTTTATGCAACAGCAATAGATCCAAAGAATGGTAGTCTCGGAACAATTGCTCCAATCGCAATTGGTTTCATTGTTGGTGCCAACATTTTGGCAGGTGGGGCTTTTGATGGTGCATCTATGAACCCAGCAGTTTCGTTTGGGCCTGCTGTTGTTAGCTGGACTTGGGCTAATCATTGGGTCTATTGGGCCGGCCCATTGATTGGTTCTGCTATTGCTGCAGTTGTTTATGAGACTTTCTTCATCACCCCTGGCTCTTATGAACAGTTACCTGTTGCAGATTATTAA 759 0.4295 MAISRIAIGSASEFGKADALKAALAEFISMLIFVFAGEGSGMAYNKLTDNGAATPAGLVAASLSHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLVRGLLYWIAQLLGSVVACLLLTIATGGMETSAFSLSSGVGATNALVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANHWVYWAGPLIGSAIAAVVYETFFITPGSYEQLPVADY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5025 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Psa7g5025 252 Gene3D Glycerol uptake facilitator protein. 4 251 IPR023271 -
Psa7g5025 252 PANTHER AQUAPORIN-8 1 252 IPR034294 -
Psa7g5025 252 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 252 - -
Psa7g5025 252 CDD MIP 26 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g5025 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g5025 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g5025 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g5025 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g5025 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g5025 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g5025 252 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa7g5025 252 SUPERFAMILY Aquaporin-like 18 241 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5025 Psa-Chr7 441691937 441694019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5025 1 252 Major Intrinsic Protein MIP AT2G36830 78.571 1.57e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5025 K09873 - gmx:100777419 454.136