Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5006 ATGGCGAAGACACTGATTTCTTCTCCATCATTCCTCGGTACTCCACTTCCTTCACTTCACCGTACTTTCTCCCCTAATCGCACCAGGCTTTTCACCAAAGTTCAATTCAGTTTCCACCAACTTCCTCCGATTCAATCCGTAAGTCATTCTGTTGACTTATCCGGAATCTTCGCTAGAGCCGAAGGTTTACTTTACACGCTCGCCGATGCTACTGTTGCGGCGGATGCGGCTGCTTCCACTGATGTTGCTGCGCAGAAGAACGGAGGTTGGTTCGGTTTTATTTCTGATGGAATGGAGTTTGTTCTCAAGGTGTTAAAGGATGGTTTGTCTTCCGTGCACGTGCCTTACTCATATGGATTTGCTATCATATTACTAACTGTTATTGTTAAGGCTGCTACACTTCCCTTGACAAAGCAACAGGTTGAATCAACACTAGCTATGCAAAACCTTCAACCTAAAATTAAGGCCATTCAAGAAAGATATGCTGGCAATCAGGAAAGAATACAACTTGAGACCTCAAGGCTTTATACTCAGGCTGGGGTTAACCCGTTGGCAGGTTGTTTACCAACTTTGGCTACTATTCCAGTCTGGATTGGTCTATACCAAGCTTTATCTAATGTGGCAAATGAGGGACTGTTAACAGAAGGTTTCTTATGGATCCCTTCTCTGGGTGGTCCCACTAGCATTGCTGCTAGACAAAGCGGATCCGGAATTTCTTGGCTTTTTCCGTTTGTGGATGGCCATCCACCTTTGGGTTGGTATGACACTGCAGCATATCTTGTTTTACCTGTTCTTCTTATTGTTTCTCAATATGTTTCAATGGAAATCATGAAACCCCCTCAGACAAATGATCCTAATCAAAAGAATACACTTCTTATTTTCAAGTTTCTCCCACTCATGATCGGCTACTTCTCATTATCTGTCCCATCAGGACTAACAATTTACTGGTTTACAAATAATGTCCTTAGCACAGCTCAACAAGTATGGTTGCGCAAACTAGGAGGTGCAAAGCCCGCTGTTAATGAAAATGCTGGCGGAATTATAACTGCAGGACAAGCTAAGAGATCAGCTTCTAAGCCAGAAAAGGGTGGTGAAAGGTTTAGGCAGTTAAAAGAAGAGGAAAAGAAGAAAAAGCTAATCAAGGCACTCCCAGTGGAGGAAGTTCAGCCTTTGGCTTCTGCTTCTGCGTCCAATGATGGCTCAGATGTAGAAAACAACAAGGAACAAGAAGTTACAGAAGAATCGAACACTTCTAAAGTTAGCCAAGAGGTTCAAAGTTTTTCTAGGGAAAGAAGAAGTAAGCGTTCAAAGCGGAAGCCTGTTGCATGA 1329 0.4312 MAKTLISSPSFLGTPLPSLHRTFSPNRTRLFTKVQFSFHQLPPIQSVSHSVDLSGIFARAEGLLYTLADATVAADAAASTDVAAQKNGGWFGFISDGMEFVLKVLKDGLSSVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTSIAARQSGSGISWLFPFVDGHPPLGWYDTAAYLVLPVLLIVSQYVSMEIMKPPQTNDPNQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKLGGAKPAVNENAGGIITAGQAKRSASKPEKGGERFRQLKEEEKKKKLIKALPVEEVQPLASASASNDGSDVENNKEQEVTEESNTSKVSQEVQSFSRERRSKRSKRKPVA* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5006 442 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 436 - -
Psa7g5006 442 Pfam 60Kd inner membrane protein 118 332 IPR001708 GO:0016021|GO:0032977
Psa7g5006 442 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 117 331 IPR028055 -
Psa7g5006 442 MobiDBLite consensus disorder prediction 350 371 - -
Psa7g5006 442 PANTHER OXA1 1 436 IPR001708 GO:0016021|GO:0032977
Psa7g5006 442 MobiDBLite consensus disorder prediction 390 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5006 Psa-Chr7 440288111 440293827 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5006 23 388 Chloroplast and Mitochondria Gene Families AT2G28800 70.350 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5006 K03217 - gmx:100817173 663.299