Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4996 ATGGCTAGATCTATGAAAGCAAAAACAAACGGTTTCAATGGAGCTCCTTCTAATAAAAAGAAGGATAATGAGTCAAAGAAGAGGTTGAATGATGGGAACAGAGATGTGGATCCTCAGTTATGGCATGTTGTTGCCGGAGGAATGGTTCAAATTCCAGAAGTTAACTCTAACATCTTCTACTTCCCTCAAGGTCATGCCGAACATGCATATCAACCTGTCCATTTTCTTGCTGACTTCAATATTCCATCCCAAATTCCATGTAGGGTTGCAGCTATCCATTATAGGGTTGATCCTCACACAGATGAAGTCTATGCAAAACTCAGGCTTGTTCCTCTCCATGTTAGCCAAGTTAGTTTTGATGATGACGCTGTTGGTGGCATTGATAACATGTCTGAAACTAAGTATCAGTCTTATACGAAAACGTTGACACAATCTGATGCAAACAATGGTGGTGGATTTTCTTGTCCTAGGAAATGTGCAGAAACACTTTTTCCTCCATTAGACTATTCAGATATGCTTCCTACTCAGGACATTTTTCCCATGGATGTGCATGGAGAAACATGGAGATTTAGACATGCTTATAGGGGCATGCCGAAGCGGCATCTGTCTAAAAAACGAAACGACTATAGATTTACCTTTTCATCAAAGAGGAAACTTGGACCATCCTATGGTAGACTTACTTCGTCTTTTGGAGAGTTGAGAATAAGTGATAAGGTGATGGGAGTTGGTAAAGTGAAGGCTGAATATGTTATTGAAGCAGTAAAATTTTGTGTTAATTTGAAACCGTTTGATGTGGTTTACTATCCTCGGGTTGGTACTCCCGAGTTTTTTGTGAAACCCTCTTTGATTAGAAAAGCCCTTCAGGTTACATGGGACGAAGGTGATTTACTTACAAATACCAAGATGTTGAATCCGTGGGAAGTCAAAGTAGTATCGGACATGCCTCCGTTCCCTTTTCTCCCTTTCTTGCCATCAAGTAAGAAACTGAGATTGGATCAACAGCCAAGTTTCCCCGTGGATGACCAATTAGCAATGCCAACATTTCCAAACAATGAAACTCCAAATGATGCCTCAACATCCGCTACTGTCTCTAATAGACCAACATTGCAAAAGGATAGCAGCAGTGAGAATGTTTCAGACTCGATAACAATTTCTAAACAATCATTAGAGAAACTGGATCATGCGAAGCCGAAAGAGTTGATGCTTTTTGGCCAAACAATGAATCATGCGAAGCCGAAAATGTTGGTGCTTTTTGGCCAAAGAATACCAATTGAAAATGCTGAGATGAAAATCACTAATTATTTGTCTAATCCTCTACAAGACCTGCCAAAACGTTCCTATGGTGAAAGGCTAGAGTGTAATACCGAGAACCAATGCAAAAAAGATACTTGTGATGAAGAAACAGTGGAGATTGAGCATTCAGGGAGTTCATCAAAAGAGCCCGTGTGA 1449 0.4023 MARSMKAKTNGFNGAPSNKKKDNESKKRLNDGNRDVDPQLWHVVAGGMVQIPEVNSNIFYFPQGHAEHAYQPVHFLADFNIPSQIPCRVAAIHYRVDPHTDEVYAKLRLVPLHVSQVSFDDDAVGGIDNMSETKYQSYTKTLTQSDANNGGGFSCPRKCAETLFPPLDYSDMLPTQDIFPMDVHGETWRFRHAYRGMPKRHLSKKRNDYRFTFSSKRKLGPSYGRLTSSFGELRISDKVMGVGKVKAEYVIEAVKFCVNLKPFDVVYYPRVGTPEFFVKPSLIRKALQVTWDEGDLLTNTKMLNPWEVKVVSDMPPFPFLPFLPSSKKLRLDQQPSFPVDDQLAMPTFPNNETPNDASTSATVSNRPTLQKDSSSENVSDSITISKQSLEKLDHAKPKELMLFGQTMNHAKPKMLVLFGQRIPIENAEMKITNYLSNPLQDLPKRSYGERLECNTENQCKKDTCDEETVEIEHSGSSSKEPV* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4996 482 Gene3D - 136 219 IPR015300 -
Psa7g4996 482 CDD B3_DNA 137 201 IPR003340 GO:0003677
Psa7g4996 482 MobiDBLite consensus disorder prediction 19 34 - -
Psa7g4996 482 MobiDBLite consensus disorder prediction 351 381 - -
Psa7g4996 482 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 286 350 IPR044835 GO:0003677|GO:0006355|GO:0009725
Psa7g4996 482 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 27 202 IPR044835 GO:0003677|GO:0006355|GO:0009725
Psa7g4996 482 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 231 291 IPR044835 GO:0003677|GO:0006355|GO:0009725
Psa7g4996 482 PANTHER AUXIN RESPONSE FACTOR 27 202 - -
Psa7g4996 482 PANTHER AUXIN RESPONSE FACTOR 286 350 - -
Psa7g4996 482 PANTHER AUXIN RESPONSE FACTOR 231 291 - -
Psa7g4996 482 MobiDBLite consensus disorder prediction 1 34 - -
Psa7g4996 482 SUPERFAMILY DNA-binding pseudobarrel domain 129 214 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4996 Psa-Chr7 439723765 439725793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4996 34 368 B3 DNA Binding Superfamily AT4G30080 37.931 4.01e-81 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4996 - - mtr:MTR_7g101280 433.721