Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4970 ATGTCTTTACAAAATAAGGGATTTTGGACGGTAAAAGGATCTGGACATGTTAGTGACAGAGAGCCAGTATTTGATAATCCTTCCAAAACTGAACCAAAACGGCCTCATCAATGGTTAATTGATGCAACTGAAGGGGAATTTTTGCCAAATAAGAAGCAAGCAATAGAAGATGCAAATGAAAGATCTAGTTCAGGATTTTCAAATGTTAATTTTACTCCGTGGGAGAACAATCACAATTTCAGTTCAGTTCCAAACCAATTTATTGATCGGTTATTTGGATCTGAAACTAGGCCTGTCAATTTCTCTGAAAAGAATACTTATGTTTCTGCTGATGATTCTAATATGAGATCAAAGATGATCTCCAATCATTATGGAGATGATGCATCTTTTGGCTTGTCTATATCTCATTCTGCTGAAGATTCTGAACCATGTATGACTTTTGGGGGAATCAAGAAAGTCAAAGTAAATCAAGTTAAGGATTTCGACATTGTACAAGCTCCAGAGGGACATGATTTTGATAGGCAGAGTAAGGGTGATCTACACGAAGCCTATAATGGGGAAATTGAGACGAGATCTGGGTCAACAGGGCAAGCCTTTGACAAGGATGGCAATGTTGCTTTACTGGGACTCACCTATGGCAGAGGGGATGCCCATATAAGATCGTTTGTTACCCCCTTTGGCAACTTAGATAACACAGTCCTATCAATTGGCGAATCCTTTAATAAAGAGGACAAAAATATAATTTCTTTTGGTGGATTCCCAGATGAACGGGGCACTATCTCTATGGGCAGGGCTACTACAGACTATGAACAGTTATATAATCAATCATCAGTTCATGTGTCAACAACAGTTCATGAAAAAGAGTTAGATGCATCAAATTCCGGTGTAGCTGAAAGTACTCCTTCGGTGGCAACAATAAAGCCTGAATCTGTGACCAAGAATAAACAAGATATCAAAAGGAAAGAATCTCCAAACACCTTCCCAACTAATGTCAGGAGCTTGATATCTACTGGTATGCTTGATGGTGTTCCTGTGAAGTATGTCTCAGTGGCGCGGGAGGAACTCCGTGGGATTATAAAAGGCTCTACCTATCTTTGTGGGTGTCAGTCATGTAACTATTCTAAGGGTCTGAATGCTTATGAGTTTGAAAGGCATGCCGGTTGCAAAACAAAACATCCAAACAATCATATTTATTTTGAGAATGGGAAGACCATTTATCAAATAGTACAGGAATTGAGGAATTCCCCGGAGAGTTCATTGTTTGACACAATTCAAACTATTTTCGGTGCACCAATTAATCAGAAGGCATTTCGTATTTGGAAAGATACTCAACTTATACTAACTAAGGGAAATATTGCAAGATATTCGTGA 1371 0.3873 MSLQNKGFWTVKGSGHVSDREPVFDNPSKTEPKRPHQWLIDATEGEFLPNKKQAIEDANERSSSGFSNVNFTPWENNHNFSSVPNQFIDRLFGSETRPVNFSEKNTYVSADDSNMRSKMISNHYGDDASFGLSISHSAEDSEPCMTFGGIKKVKVNQVKDFDIVQAPEGHDFDRQSKGDLHEAYNGEIETRSGSTGQAFDKDGNVALLGLTYGRGDAHIRSFVTPFGNLDNTVLSIGESFNKEDKNIISFGGFPDERGTISMGRATTDYEQLYNQSSVHVSTTVHEKELDASNSGVAESTPSVATIKPESVTKNKQDIKRKESPNTFPTNVRSLISTGMLDGVPVKYVSVAREELRGIIKGSTYLCGCQSCNYSKGLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRNSPESSLFDTIQTIFGAPINQKAFRIWKDTQLILTKGNIARYS* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4970 456 Pfam Tify domain binding domain 357 412 IPR032308 -
Psa7g4970 456 PANTHER DNA-BINDING PROTEIN 1 442 - -
Psa7g4970 456 PANTHER AUTOIMMUNE REGULATOR 1 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4970 Psa-Chr7 438053129 438058471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4970 310 441 PHD Transcription Factor Family AT3G53680 50.376 1.47e-36 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4970 - - gmx:100802229 702.59