Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4961 ATGGAGGCTTTGAAAATTTTACTTGATGTGAGAAATCACCCTGTTTTGATTCATTGCAAACGAGGGAAGCATAGAACAGGTTGTGTAGTTGGTTGTTTCAGAAAGATGCAGAACTGGTGTCTGTCTTCTGTGTTTGAGGAGTACCAGCGCTATGCTGGTGCTAAATCCAGGACAACGAATTTAACATTTATAGAGATGTTTGACATCATAAATCTTAGGCAGTGCCTCTACAGCATCATCTACAGTATCAAGGTGCTTCAAAGAACGCAGATTGATGTATCAGGCGAGACTACGCAGAAGCCACCCCGTTTGACATCGTTTAGCTGCTGCACTGGCTATCAACTCCATTTTTGGATTTGGTAG 363 0.4242 MEALKILLDVRNHPVLIHCKRGKHRTGCVVGCFRKMQNWCLSSVFEEYQRYAGAKSRTTNLTFIEMFDIINLRQCLYSIIYSIKVLQRTQIDVSGETTQKPPRLTSFSCCTGYQLHFWIW* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4961 120 PANTHER TYROSINE-PROTEIN PHOSPHATASE 1 91 - -
Psa7g4961 120 Pfam Tyrosine phosphatase family 2 69 IPR004861 -
Psa7g4961 120 Gene3D Protein tyrosine phosphatase superfamily 1 71 IPR029021 -
Psa7g4961 120 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 1 91 - -
Psa7g4961 120 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 2 69 IPR029021 -
Psa7g4961 120 ProSitePatterns Tyrosine specific protein phosphatases active site. 17 27 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4961 Psa-Chr7 435182875 435184018 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4961 1 81 Protein tyrosine phosphatase (PTP) family AT3G02800 71.605 6.81e-41 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4961 K18045 - gmx:100787713 166.007