Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4950 ATGTGTGATAGGTATCATTATCTAGTAACCAAGTGCACTTCAACTTCTTATGCTTTTAATCTTCTCGAGGAAAGATGTGGTTATTTTGATATGATGTTGATTGATCTTTGTATGCCAAACATGGACTCGTATCACTTTATTCAATATGTAACCCTACAACACAAAATCCCTGTCATTGTGATTTCTTCTGATGCCACAGAAAGTTCTGTCCTAAAGTCTATAATTCATGGCGCATGTGATTATTGGGTTCAACCTCTGCATGAAAAACAATTCAAGACTATGTGGCAACATGTTGCCAGAAAAACTTTGATGGAGAATAAAGAACATCAAGATCTTGGATTCTTGAAGGTTCGAACTGATAAAGAACCTGAAGTTCTTGAAATCTTGGAGACCGAAAGTCATAAAGAACATCAAGATCTTGGATTCTTGAAAGCGCAACTCCATAAAGAACCTGAAGTTCTTGAAATCTTGGAGACTGAAAGTCATAAAGAACATCAAGATCTTGGATTCTTGAAAGCGCAAAGCCATAAAGAACATGAAGTTGTTGAAATCATGGAGGGTCCTCGGCATGAAAGAAAACGGGAGAGAGAAGATGATAAACCTGGAAAAGAAACAGGTGGAAAAAAGAGTCGGTTATCATGGACGCCGCAACTGCATCAACAGTTTGTAAATGCTGTGAACCAACTTGGCGTAGATGGTATGATTGTTTTATATTTGTTTGTATTCTTTAACAAGTCAAGTTATGTGCATTGTTGTTTATTTTCAGAGGCAAAACCTAGAAAGATTCTCAAAGTTATGGATGTTTCTGGTTTAGCAACAGCACAGGTTGCAAGTCATTTGCAGAAGTATAGAAATTATTTGAAGAGACCAAAGTCAAAGAAAAGTCCAACTGAGTGTCTTAATAAAACATGGTTAGAATCTGAACATGCTAACTCAATGATAGAACAAGACCAAAGTCCTCAACTGAATTTAACTCTTCAAAGTGATAATATCTCTGAAACACAACAACATTCAACAGATGTCGGCGATTATCGAGTCTCCGACATTATGAACAACGATTTTCTTCCTGATCCATCTGACTTGCTCTTTGATTTAGATGATGAGTTAATATCATTATTATTTTAA 1125 0.36 MCDRYHYLVTKCTSTSYAFNLLEERCGYFDMMLIDLCMPNMDSYHFIQYVTLQHKIPVIVISSDATESSVLKSIIHGACDYWVQPLHEKQFKTMWQHVARKTLMENKEHQDLGFLKVRTDKEPEVLEILETESHKEHQDLGFLKAQLHKEPEVLEILETESHKEHQDLGFLKAQSHKEHEVVEIMEGPRHERKREREDDKPGKETGGKKSRLSWTPQLHQQFVNAVNQLGVDGMIVLYLFVFFNKSSYVHCCLFSEAKPRKILKVMDVSGLATAQVASHLQKYRNYLKRPKSKKSPTECLNKTWLESEHANSMIEQDQSPQLNLTLQSDNISETQQHSTDVGDYRVSDIMNNDFLPDPSDLLFDLDDELISLLF* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4950 374 MobiDBLite consensus disorder prediction 185 211 - -
Psa7g4950 374 MobiDBLite consensus disorder prediction 185 207 - -
Psa7g4950 374 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 339 IPR045279 GO:0009736
Psa7g4950 374 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 1 339 - -
Psa7g4950 374 SUPERFAMILY CheY-like 4 115 IPR011006 -
Psa7g4950 374 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 256 285 IPR006447 GO:0003677
Psa7g4950 374 Gene3D - 1 113 - -
Psa7g4950 374 SUPERFAMILY Homeodomain-like 207 289 IPR009057 -
Psa7g4950 374 Pfam Response regulator receiver domain 6 93 IPR001789 GO:0000160
Psa7g4950 374 Gene3D - 206 289 - -
Psa7g4950 374 ProSiteProfiles Response regulatory domain profile. 1 99 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4950 Psa-Chr7 434782284 434784071 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4950 18 311 Response Regulator Gene Family AT3G16857 30.952 8.29e-34 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Psa7g4950 Response_reg 1.3e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4950 - K14491 cam:101491966 187.193