Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4945 ATGGTCACCAGTTTTCAGGGGCATAAGGAGTGGATTAATGAAGTGAATTTATTAGGGGTGATTAAGCATCCAAATTTGGTGAGGTTGGTTGGTTATTGTGCTGAAGATGATGAAAGAGGGATACAAAGGCTTTTGGTGTATGAGTTTATGCCTAATAAGAGCTTGGAAGATCATCTTCTGGCTCGTGTTCCTTCGTCGGTTCTTTCTTGGATTAGCAGATTAAAGATTGCTCAAGATGCTGCTCGTGGTTTGGCTTACCTACATGAAGAAATGGATTTTCAGCTAATATTTCGAGATTTTAAAACATCCAACATCTTGCTAGATGAGGACTTCAATGCAAAGCTTTCAGATTTTGGACTCGCTCGGCAAGGACCCTCAGAAGGGTCTGGTTATGTTTCAACAGCAGTCGTTGGCACCATAGGATATGCTGCGCCAGAGTATGTTCATACTGGTAAGCTGACTGCTAAGAGTGATGTTTGGAGCTTTGGCGTAGTTCTTTATGAGCTTATCACTGGGAGGAGAGCCGTAGAAAGAAACTTACCAAGAAACGAACAAAAGCTTTTGGAGTGGGTAAGATCTTATGTATCTGATTCTAAGAAGTTCCATCATATAGTCGATCCTCGGCTTGAGGGACAGGATTGCACCAAATCAGCTCATAAACTTGCAATCCTAGCAAACAAGTGTCTAACGAAGCAGCCAAGGTCTCGCCCAAAAATGAGTGAGGTGGTTGAGATTCTCGACAACATTATCAACGAGATTGTTCCTGTGGATGATTGCATTTCCCAAACTGTTGCAGAAACTGGAGAAGGAAAAGAAGTAAATTTATCTGTAGAGGATGCTGAGCGGGAACCAGCTAAACAGGGGAGTAATTATCGGAAGAAGGTTTTTGAATTCAGAGACATGGTCAGCTTAAGAAATAAATCCGTTGGAAGGTTTGATTGGAAAAGTTGGGCACCTGGGCTTGTAAGAACTTGGTGA 978 0.4223 MVTSFQGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGIQRLLVYEFMPNKSLEDHLLARVPSSVLSWISRLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDFNAKLSDFGLARQGPSEGSGYVSTAVVGTIGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWVRSYVSDSKKFHHIVDPRLEGQDCTKSAHKLAILANKCLTKQPRSRPKMSEVVEILDNIINEIVPVDDCISQTVAETGEGKEVNLSVEDAEREPAKQGSNYRKKVFEFRDMVSLRNKSVGRFDWKSWAPGLVRTW* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4945 325 PANTHER OS01G0588500 PROTEIN-RELATED 4 287 - -
Psa7g4945 325 ProSiteProfiles Protein kinase domain profile. 1 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4945 325 Pfam Protein kinase domain 8 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4945 325 Gene3D Transferase(Phosphotransferase) domain 1 51 262 - -
Psa7g4945 325 SUPERFAMILY Protein kinase-like (PK-like) 6 246 IPR011009 -
Psa7g4945 325 Gene3D Phosphorylase Kinase; domain 1 2 50 - -
Psa7g4945 325 PANTHER SERINE/THREONINE-PROTEIN KINASE PCRK1 4 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4945 Psa-Chr7 433631189 433634371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4945 5 246 Glycoside Hydrolase AT3G07070 49.794 2.85e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa7g4945 Pkinase 9.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4945 - - gmx:100811825 548.51