Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4944 ATGGGAATTAATATTGTTTCTGCTATGGGAGTTTGTTTAGGTAGCCAAATCAAAGCTGAAGGCCAAACTAATTCTGTTTCAGGGTTAAGTTCAAAGAGTGTGAATGTTGTTGAAACAGAAGATATCGCTCTCAGTAGCCCATGTTGCAAGGCTTCTGTTGATCTTAGTAGCTCAACTAGTGAGATTGAGATATCGACGGGATTGGTGCCTCGGACTGACCTGTGTGTGGGGGAGATCTTGCAATCATCCAATTTGAAGAGCTTTGCTTTGACAGAACTTCAGGCTGCTACTAGAAATTTTCGTGTCGACAGTGTGTTAGGAGATGGAGGTTTTGGATCGGTTTTTAAGGGTTGGATTGATGAACACTCGCCTTCTGCTGCTAAGCCTGGCAAGGGCATTGTTGTTGCTGTCAAAAAACTTTATCAGGATGGCTTCAAAGGTCGCGAGGAGATGTTGGCTGATGTCAATTATCTAGGCCAGCTTTCACATCCTCATCTAGTGAAACTGATTGGATACTGCCTTGAAGATGAAAACAACCTTCTGGTCTACGAATTTATGCCTCGTGGCAGCTTGGAGAATCACTTGTTTCTCAGAGGCTCTTATTTTCAACCTCTTTCTTGGTGCCTACGTTTGAAGGTTGCTCTTGGTGTTGCGAAAGGCCTTGCATTTCTTCACAGTGCTGAGAAAAAAGTGATATACCGAAATTTCAAGACTTCAAATGTCTTGCTAGATTCAAATTATAATGCAAAACTTTCTAATTTTGGGCTGGCAAAGGTCGGATCTGCGGTTGATAAAGGTCGTGTCTCCACCCGACTAACATATGGATATGCAGCTCCAGAATACGTAGCAACTGGTATTCACAGTGCTAAGAGTGGTGTCTATAGTTTCGGGGTTGTCCTATTGGAAATATTATCAGGGAGGAGAGTTATTGACAGGAATAGACCACAAAGACAACAGAATTTGGTGGAATGGGCTAAGCCTTATCTGTCCAACAAGCGTAAGATTTTGCGCGTGTTGGATAACCGTCTTGAAGGCCAATATGAACTAGACGGTGCCTATAAGGTTGCTACACTCTCCCTAAGGTGCCTTGCATTAGAAGCAAAGTTGCGACCAAACATGGATGAGGTTGTTACAAATTTGGAGCAGTTGCAGGTTCAAAATATAAATGGATGCAATCAGAATCGTTTGCGTAGAAGAAGCGCTGATGATGTTACCTGTGTTAGAACAACCACGGCTTATCCTCAACGTTCTACGTCTATGCTCAGTACATGA 1272 0.4292 MGINIVSAMGVCLGSQIKAEGQTNSVSGLSSKSVNVVETEDIALSSPCCKASVDLSSSTSEIEISTGLVPRTDLCVGEILQSSNLKSFALTELQAATRNFRVDSVLGDGGFGSVFKGWIDEHSPSAAKPGKGIVVAVKKLYQDGFKGREEMLADVNYLGQLSHPHLVKLIGYCLEDENNLLVYEFMPRGSLENHLFLRGSYFQPLSWCLRLKVALGVAKGLAFLHSAEKKVIYRNFKTSNVLLDSNYNAKLSNFGLAKVGSAVDKGRVSTRLTYGYAAPEYVATGIHSAKSGVYSFGVVLLEILSGRRVIDRNRPQRQQNLVEWAKPYLSNKRKILRVLDNRLEGQYELDGAYKVATLSLRCLALEAKLRPNMDEVVTNLEQLQVQNINGCNQNRLRRRSADDVTCVRTTTAYPQRSTSMLST* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4944 423 Pfam Protein tyrosine and serine/threonine kinase 102 380 IPR001245 GO:0004672|GO:0006468
Psa7g4944 423 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 55 402 - -
Psa7g4944 423 PANTHER OS01G0588500 PROTEIN-RELATED 55 402 - -
Psa7g4944 423 ProSiteProfiles Protein kinase domain profile. 100 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4944 423 Gene3D Phosphorylase Kinase; domain 1 77 185 - -
Psa7g4944 423 ProSitePatterns Protein kinases ATP-binding region signature. 106 139 IPR017441 GO:0005524
Psa7g4944 423 SUPERFAMILY Protein kinase-like (PK-like) 82 385 IPR011009 -
Psa7g4944 423 Gene3D Transferase(Phosphotransferase) domain 1 186 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4944 Psa-Chr7 433628582 433630760 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4944 78 380 Glycoside Hydrolase AT3G07070 46.078 2.26e-88 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa7g4944 PK_Tyr_Ser-Thr 8.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4944 - - mtr:MTR_4g063930 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4944 7 433628582 433630760 Psa7g4944 7 433628582 433630760 ECH