Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4943 ATGGGTAACGGAATAGGAAAACTAACGGTGTGTTTCACGGGAAACAACGGTGGTCGGAAACACGATATATCGATTTTAATAACTGACCCGTTAGACGAAGGACTTGGTCACTCTTTCTGTTATGTAAGACCCGACCCGACCCGTTTATCGAGTTCGAAGGTTCATTCTGAAGAAACGACAACGTTTAGAACTATCTCTGGCGCTTCCGTTAGTGCTAACACGTCGACGCCGTTATCAACGGCGTTTATGGATTTATACTCTTACGGATGTTTCGATAGAGCTGCGGCGTTTGAGAGTTCTACTTCCTTTGCTTCTCTTCCGTTGCAACCGATTCCGAAGAATCTGATGGGTACCGGTTCGGGTCCTTTTTCGAGTAATTTCGGTGGTGGTGGTTTTCCGGGTTCCGGTCCACTTGAGCGTGGGTTCATGTCCGGTCCGATTGAGCGTGGGTTTATGTCTGGTCCGATTGATCGTGGTTTATTTTCTGGTCCGATTGAAAAAGAAAACTCCGATCAGTTTCCGAGAAGCTTCTCTCATAGTGGATTAGGGTTTTCCGTTAGACCTAGAACAAGGAAAGAGAAATGGATTCGTGTTCTTCAGAGAGCGATTTCGAAGACTCTGTCGCGTGGACAGAACTCTATTGTTACTCCGATCAAAGGTGTGGCGGTTAAGGAACCACCGGAGTGGATCCTTGCTGGGGAGAAGCATAACGAGAATTTGACGGTGAGTAGTTTGAATTTGAGTAGTGAAGGTAGTTTGGAAGATGATGATTCAATGGGGAGTCAGAATCTTCAATGGGCTCAGGGGAAAGCAGGGGAGGATCGTGTTCATGTTGTTGTTTCTGAAGAACATGGTTGGGTTTTTGTTGGGATTTATGATGGTTTCAATGGTCCTGATGCACCTGATTATTTACTTTCGAATCTGTATACTTTTGTTCACAAGGAACTTAAAGGGTTGCTTTGGGATGATGGGGTTTCCTCGGATAATTCTAATTCGAAAGCGCGCAATTCGATTGATGATGTTGTTGGGAAAGAAGATAAGGTGTTTGATGATTGTTCTCAATGTGTTGATCAAGAGAAAGAGGGTTCAGTTTCGAAGAAAAAAAAGAGGGGTAAGAATTCGAAGAACAAGTACAAAGATGCAGCAATGAAACACGAAGAAAATCACAGGAGATGGAAATGTGAATGGGACAGGGAGAGACTAGAGCTTGATAGAAGATTGAAGGAGCAACTTAGTGGTGACGACGGTGACAATGATTCTGTTAATCATTCAGATGTTTTGGAAGCTCTATCTCGAGCTTTGAGGAAAACCGAGGAGTCTTATCTTGATGTTGCAGATAAGATGGTGATGGAGAATCCAGAACTTGCTTTGATGGGTTCGTGTGTTCTTGTAATGTTGATGAAAGGGGAAGATGTTTATGTGATGAATGTGGGAGATAGTAGAGCTGTGTTGGCACAAAAGGCTGAACCTGATTATTGGATTGGGAAAATTCGACAGGATTTGGAGAGGATTAACGAAGAAACAATGCATGATCTTGAATCATGGGAGGATGCTGATAAATCAAATGCTATTCCTAGTTTAAGTGCTTTTCAGCTTACCAAAGATCATAGTACCAATGTTGAAGAGGAAGTAATCAGAATAAGAAAAGAACACCCGGATGATCCTTGTGCCGTAGTCAATGATCGTGTTAAGGGATCTCTCAAGGTTACTCGAGCATTCGGTGCCGGATTTCTCAAACAGCCAAAATGGAACAATGCACTTCTGGAGATGTTTAGAATCGATTACGTAGGAAATTCTCCATACATCACTTGCCTACCATATCTTAAACACCACAGATTAGGCCAAAAAGACAAGTTCCTGATTCTATGCTCCGACGGCCTCTATCAGTACTTATCAAACGAAGAAGCAGTAGCCGAAGTTGAACTTTTCATCACATTACAACCTGAAGGAGACCCTGCTCAACATTTGGTTGAAGAAGTCTTGTTTCGTGCCGCAAAGAAAGCTGGTTTGGACTTTCACGAATTGCTCGAGATTCCACAAGGCGATAGGCGACGTTACCACGACGATGTCTCCATCATTGTTATCTCTTTGGAAGGAAGGATATGGAGATCATGTGTATAA 2121 0.4309 MGNGIGKLTVCFTGNNGGRKHDISILITDPLDEGLGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFMDLYSYGCFDRAAAFESSTSFASLPLQPIPKNLMGTGSGPFSSNFGGGGFPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPIEKENSDQFPRSFSHSGLGFSVRPRTRKEKWIRVLQRAISKTLSRGQNSIVTPIKGVAVKEPPEWILAGEKHNENLTVSSLNLSSEGSLEDDDSMGSQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTFVHKELKGLLWDDGVSSDNSNSKARNSIDDVVGKEDKVFDDCSQCVDQEKEGSVSKKKKRGKNSKNKYKDAAMKHEENHRRWKCEWDRERLELDRRLKEQLSGDDGDNDSVNHSDVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWIGKIRQDLERINEETMHDLESWEDADKSNAIPSLSAFQLTKDHSTNVEEEVIRIRKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYITCLPYLKHHRLGQKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4943 706 Pfam Protein phosphatase 2C 405 653 IPR001932 -
Psa7g4943 706 PANTHER PROTEIN PHOSPHATASE 2C 16 706 IPR015655 GO:0004722|GO:0006470
Psa7g4943 706 SMART PP2C_4 257 695 IPR001932 -
Psa7g4943 706 Coils Coil 498 518 - -
Psa7g4943 706 SUPERFAMILY PP2C-like 270 698 IPR036457 -
Psa7g4943 706 Gene3D - 235 702 IPR036457 -
Psa7g4943 706 MobiDBLite consensus disorder prediction 360 382 - -
Psa7g4943 706 CDD PP2Cc 403 697 IPR001932 -
Psa7g4943 706 ProSiteProfiles PPM-type phosphatase domain profile. 256 697 IPR001932 -
Psa7g4943 706 PANTHER - 16 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4943 Psa-Chr7 433287429 433290968 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4943 1 706 PP2C-type Phosphatase Gene Family AT1G07630 68.889 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4943 - - pvu:PHAVU_011G064200g 1122.84