Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4926 ATGTTTTCTGCTGATACTCTTGTTGAGAATTTTCCTGGTTCTGTTAATGGATGCATGTTTGGAGACATTCCTGTGTCTGTTTTTTCAAACCAGAATCCAGAAAATGAGTTCAATTTTGAAGATTCTGTTTCAATTTCTATATCCCCTTCAACTCATTCAGAATCTGCTAGTGGTGAATCTTCTGAGAGTACTAAGTATTCGAATCCTATTCTTAGATACATAAGTGATATACTCATGGATGAAGAGGATGATTTGGAGAGAAAACCCTGTATGTTGCAGGATTGTTTGAAACTCCAAGCTGCTGAAAAATCGTTTTATGATGTTTTAGGTAATAATTTGGGATCAGGAACAGGAACAGGAACGGGAACTAGTTCTAGTTCTGAGAGCTATAGTAATTGCAGTTACACCACTGATAATTCTGTAGTTGATTGTGATTCACCAGAAAATAACACCTATGAGGTGTTTGATAAAATTCCTCATGATCCGTTTAGAGAGGTAGAAGCTGCTTTTAATTTTCCAAATGGTGCTTGGAAGATGAATGAAGAGGGTAATAATATGGTTTTGGGTTCTAGAAGGTCAAGGGAGAAGAGAGGCTACTTGATGAATGATATTGGTATCTTACATGGAGAAGATCTGAGAAGTAACAAGGTTTCAGCTGTTTATTCTGATGATTCAGAGCTATCAGAGATGTTTGATGAGGGATCTAATAGAAAAACATCACGTTCCAAGAAAGGTTCAAACAAGGGTAAAAATTTAAGTACTACGGTAGATTTATGGTCTTTGTTAACTCAATGTGCACAAGCTGTTGGTAGCTATGATCAAAGGAATGCTAATGACATACTCAAGCAGATTAGGCAGAACTCTTCACCTCTTGGAGATGGACTTCAGCGTTTAGCTCATTACTTTGCCGATGGGCTCGAGGCACGGTTATCTGCTGGTACGCCAATGTATAAGCTCCTTGAGTCGTCGTCTTCTGCAGATATGTTAAGAGCTTATAAAGTTTACATCACAGCATCTCCATTTCAAAGGATGTCGAATTTCTTGGCCAACAGAACTATTCTGAATCTGGTAGAAAACAAAAGCAGCATCCACATTATTGACTTTGGGATTTTCTATGGCTTTCAGTGGCCTTGTCTCATTCAGCGTCTTTCGGAGAGAATCGGCGGGCCTCCGAAGCTTCGTATTACAGGAATTGATCTTCCTCAGCCAGGGTTTAGGCCTGCAGAAAGGGTTGAGGAGACGGGTCGATCTCATTCAGCGTCTTTCGGAGAGAATCGGCGGGCCTCCGAAGCTTCGTTCAGGGAAGCAATGTTTCATTTCTCATCATTGTTTGATATGCTTGAAGCTACTGTGCCGCGTGATGATCCATATAGGTTGATGTTTGAGAGAGGCTTATTTGGAAGGGATGCAGTAAATGTGATAGCTTGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAGACTTACAAGAATTGGCAGGTTAGGAATAAGAGAGCAAGATTCAAGCAACTTCCATTGGCTCCTAAACTAGTGGACCGAGTGAAAGAAATGGTGAAGAAGGAATATCCAAAAGATTTTGTAGTTGATGAAGATGGGAAATGGGTTCTGCATGGTTGGAAAGGACGTATTCTGCAAGCTGTTTCTTGTTGGGTTCCTGCTTAA 1659 0.4075 MFSADTLVENFPGSVNGCMFGDIPVSVFSNQNPENEFNFEDSVSISISPSTHSESASGESSESTKYSNPILRYISDILMDEEDDLERKPCMLQDCLKLQAAEKSFYDVLGNNLGSGTGTGTGTSSSSESYSNCSYTTDNSVVDCDSPENNTYEVFDKIPHDPFREVEAAFNFPNGAWKMNEEGNNMVLGSRRSREKRGYLMNDIGILHGEDLRSNKVSAVYSDDSELSEMFDEGSNRKTSRSKKGSNKGKNLSTTVDLWSLLTQCAQAVGSYDQRNANDILKQIRQNSSPLGDGLQRLAHYFADGLEARLSAGTPMYKLLESSSSADMLRAYKVYITASPFQRMSNFLANRTILNLVENKSSIHIIDFGIFYGFQWPCLIQRLSERIGGPPKLRITGIDLPQPGFRPAERVEETGRSHSASFGENRRASEASFREAMFHFSSLFDMLEATVPRDDPYRLMFERGLFGRDAVNVIACEGAERVERPETYKNWQVRNKRARFKQLPLAPKLVDRVKEMVKKEYPKDFVVDEDGKWVLHGWKGRILQAVSCWVPA* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4926 552 MobiDBLite consensus disorder prediction 228 249 - -
Psa7g4926 552 Pfam GRAS domain family 430 549 IPR005202 -
Psa7g4926 552 Pfam GRAS domain family 260 416 IPR005202 -
Psa7g4926 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 241 417 IPR005202 -
Psa7g4926 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 27 233 IPR005202 -
Psa7g4926 552 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 432 551 IPR005202 -
Psa7g4926 552 ProSiteProfiles GRAS family profile. 249 550 IPR005202 -
Psa7g4926 552 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 432 551 - -
Psa7g4926 552 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 27 233 - -
Psa7g4926 552 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 241 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4926 Psa-Chr7 431072977 431075047 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4926 213 552 GRAS Transcription Factor Family AT1G07530 40.667 2.93e-96 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa7g4926 GRAS 4e-47 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4926 - - gmx:100815586 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4926 7 431072977 431075047 Psa7g4926 7 431072977 431075047 ECH
Psa3g3188 3 269102410 269107471 Psa7g4926 7 431072977 431075047 ECH
Psa5g6548 5 551887459 551890276 Psa7g4926 7 431072977 431075047 PCT