Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4925 ATGGTTTCCTTCACAGATCCTTCCCTTGAAGACACTGATTTTTCAGAAACCATCAACTTCATAAGCCAAATCCTTATGGAAGAAAACGTTGATCACACACCATTTTATGATCCCTTTAGCTTACAAATCACAGAAAAATCATTCTATGATGCTCTCTTACACCAGAATAAACCTATCTCCCCTAATCACCACCCCTTACATATTCATCATAATCCTAATGGCAGAACTAGTCTCAGTGATGGACTCATAGATTTGGATTCTGTTTCCTTATTCAAGAGAGGTTTAGAAGAAGCCAACAAGTTTCTTCCTCCTCCGCCTCAACTAGACTCATCCAATTTCAATATGATTAGAGAGAAAGAGAGTCCATTTGTGTTGAAGGGTAGAAAGAATCACGAGCGCGAAGAAGAACAAGGGAGGAGAAGTAACAAGCAGTCAGCTATTAGTGTTGCTGATGAAGATGAATTATCAGAAATGTTCGATAAAGTTTTGCTTAATGTCGAACGCGATTGCTTGCAGAATGAGCAACCATCTTCGTCTGATGGAGGAAAGGTTGATTTAAGGAATCTTCTGCTTATGTGTTCACAAGCTATGTATGCAAATGACAATAGAAATGCCAATGGAATTCTGAAGCGGATTAGGCAACATTCTTCGCCGTTTGGAGATGCATCACAAAGGATGGCACATTACTTCGCCAATGGCCTCGAGGCACGTCTTGTAGGGGATGGACCCGGTGCGCAGACATTCTATTCTGCGCCGAGCGCCAAGAGGATCACTGCTGCTGAGTTTTTGAAAGCATACCAAGTTCATTTTATTAGCCCTCCATTCAAAAAATTTGCATACTTGTTTGCAAATGAAATGATTATGAAAGTTGCTGCAAAGGCGGAAAAGCTTCATATTATTGATTTTGGTATCCTTTATGGTTTTCAATGGCCGATTCTTATTAAGTTTTTATCAAATAGAGAAGGTGGACCTCCAAAGCTGAGGATCACGGGGATAGAGTTTCCTTTACCCGGATTTCGCCCGACAGAAAGAATTGAGGAGACCGGTCGTCGTCTTGCCAACTATTGCAAGCGTTTCAATGTTCCGTTCGAGTACAATGCCATAGCGTCACGGAACTGGGAAACAATTCGAGTTGAAGATCTTAAAATCAAAACCAACGAGGTAATCGCAGTGAACTGTTTGACGAGGTTTAAAAATTTACTAGATGAGAGTATTGATGCGAACAGTCCTAGAAACGCGGTTCTGAACTTGATCAGGAAGATAAATCCGAACATTTTTACTTTGTCCATTATTAATGGATCGTATAATTCACCGTTCTTTGCTACGCGGTTCAGGGAGGCATTGTTTCATTTCTCTGCTGTTTATGATTTGATTGGCACTGTCGTACCAAGGGAAAACGAATGGAGGATGATGATTGAGAGAGAAATCATGGGTAGAGAAGTTATGAATGTTGTAGCCTGTGAAGGTTTAGAGAGAGTTGAGAGGCCTGAGACATACAAACAATGGCAGGTTAGGAATACAAAGGCAGGTTTCAAGCAGCTTCCATTGGATTCAGAACTAATCGAAAAATTTAGGACTAAGTTGAGAAAATGGTATCATAAAGATTTTGTTTTTGATGAAGACAACAATTGGATGCTTCAAGGTTGGAAAGGTCGCATTTTATATGCTTCAACTTGTTTGGTTCCTGCATAA 1692 0.4031 MVSFTDPSLEDTDFSETINFISQILMEENVDHTPFYDPFSLQITEKSFYDALLHQNKPISPNHHPLHIHHNPNGRTSLSDGLIDLDSVSLFKRGLEEANKFLPPPPQLDSSNFNMIREKESPFVLKGRKNHEREEEQGRRSNKQSAISVADEDELSEMFDKVLLNVERDCLQNEQPSSSDGGKVDLRNLLLMCSQAMYANDNRNANGILKRIRQHSSPFGDASQRMAHYFANGLEARLVGDGPGAQTFYSAPSAKRITAAEFLKAYQVHFISPPFKKFAYLFANEMIMKVAAKAEKLHIIDFGILYGFQWPILIKFLSNREGGPPKLRITGIEFPLPGFRPTERIEETGRRLANYCKRFNVPFEYNAIASRNWETIRVEDLKIKTNEVIAVNCLTRFKNLLDESIDANSPRNAVLNLIRKINPNIFTLSIINGSYNSPFFATRFREALFHFSAVYDLIGTVVPRENEWRMMIEREIMGREVMNVVACEGLERVERPETYKQWQVRNTKAGFKQLPLDSELIEKFRTKLRKWYHKDFVFDEDNNWMLQGWKGRILYASTCLVPA* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4925 563 MobiDBLite consensus disorder prediction 124 141 - -
Psa7g4925 563 MobiDBLite consensus disorder prediction 124 149 - -
Psa7g4925 563 ProSiteProfiles GRAS family profile. 177 561 IPR005202 -
Psa7g4925 563 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 7 61 - -
Psa7g4925 563 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 82 562 - -
Psa7g4925 563 Pfam GRAS domain family 186 558 IPR005202 -
Psa7g4925 563 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 61 IPR005202 -
Psa7g4925 563 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 82 562 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4925 Psa-Chr7 431046421 431048112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4925 11 562 GRAS Transcription Factor Family AT2G29060 46.916 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa7g4925 GRAS 9.2e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4925 - - gmx:100795855 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4925 7 431046421 431048112 Psa7g4925 7 431046421 431048112 ECH
Psa5g6549 5 551890734 551894561 Psa7g4925 7 431046421 431048112 PCT
Psa7g4925 7 431046421 431048112 Psa5g6548 5 551887459 551890276 PCT