Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4923 ATGGATCCTCGTTTCAACTCCAATCACACCAACAACGGTTTCAAATTCAACCAAATTCCCAATTCAATCGATTCAGACGACCACACCTTTGGATTTATAGATGATCTTTTTCTTCTTCCACCACCTGATCCAAACAACACTTCGATTTCCGCCATAACTACCGCGGAAGAAGATTCACCCTTGGATGAGACTGATTTCTCTGCTACTGTTCTGCGTTACATAAATCAAATGCTCATGGAAGAAGACATGGAGAAGAAACCATGTATGTTTCATGATCCATTGGCTTTACAAGCTGCTGAGAAGTCGTTCTATGAAGTCATTGGTGAGACATACCCTTCTTCTTATGCTTCCGAGAGTCCTGAGGATAGTCTTAACAGTAATTTCAGTAGCTATAGCAATTGTGGTACCACTACTAGTACTAGTGGAAGTAGTTCTGTTGAGTATGAATCGTATTGGAGTAATTTTGATGTTTCGGAGTACAAGCCTTCGATATTGCGAACCACTTTTCCTTCTGATTTTGTTTTTCAAGCTAGTTCAATGAATGGGACTAGTAGTAGCAATTTCGGTTTAGTGAATAATGGGTTTTTAGTTAGTTCTAAGGATGGATTTCCTGATTCAAATTTGCTAAGTAAGAGTGAGTCTGTACTGCAATTTGAGAGGGGTGTGGAGGAAGCTAATAAGTTTCTTCCTAAAGGGAATCCATTGGTTATTGACCTGGACAAGAACAACCCTTTTATCCCTTCTTTTAGGAAGGCTCCTCAGGAGGTAGTTGTTAAGACGGAGAGTAATGAAGGGGAACATTTTTCTGCTGAGGCGAGGGGGAGGAAAAATCACGAGCGGGGAGATGAAACGGATTTACAAGATGAGAGAAGCAATAAGCAGTCAGCTGTTTACATTGATGACACTGAGTTATCAGAGCTATTTGATAAGGTGCTGCTGGGCACAGGGTGCGGGAAGGAGGGAGCTCCTACGTGTGATAGTAAGGAAGTGAAGCCTAATGGACTAGACATGAGTTTGCAGCAGAAAGAAGAAGCGAACAATTTTGGTGGTGGAAAGGGCAGTGGTAAGAAACGAGGTAACAAGAAAGGTCTTGTGGATCTGAGAACAATGTTGATTATGTGTGCACAATCTGTTTCTTCTGATGATCGTGCCACTGCTAAGGAGTTATTAAAGCAGATAAGGCAACACTCTTCTCCACTTGGTGATGGATCTCAGAGGATGGCTCATTGCTTTGCGAATGCCCTCGAGGCTCGCTTGTCTGGCACGGGCACTCAGATTTATACTGCTTTATACTCCAAAAGAAACTCTTCCGCTGACATGGTGAAAGCTTACCAAATGTTTATTTCAGCCTGTCCATTCAAGAAGCTTGCAATCATTTTTGCAAACCATACAATTTTGAATCTAGCCAAGGATGTAGAAACTCTTCACGTTGTAGATTTTGGCATCCGTTATGGCTTCCAGTGGCCTGCCCTTATTTATCGTCTATCAAAACGGCCTGGTGGGCCTCCTAAGCTGCGCTTGACTGGGATAGAGCTCCCTCAACCTGGCTTCAGGCCTGCAGAGAGAGTTCAGGAGACAGGGCTCCGCCTGGCAAGGTATTGTGAACGTTTTAATGTTCCATTTGAGTTCAATGCTATTGCACAAAAATGGGAAACCATCAAAGTGGAGGACTTGAAGATACAGAAAAATGAACTTCTTGTTGCGAATTGTATATGTCGGTTTAAAAATCTACTTGATGAGACAGTTGTGCTGAATAGTCCTAGGGATGCTGTTTTAAAATTAATTAAGAATTCAAAACCCAATATCTTTATACATACTACTGTCAATGGGAGCTATAATGCTCCATTCTTCGTGACACGGTTCAAGGAGGCTCTTTTCCATTACTCTACAATGTTTGATGTGCTTGACATCAATGTTGCTCGTGAAGATCCAACGAGGTTGATGTATGAGAAAGAGTTCTGTGGGAGGGAGGTAATGAATACTATAGCTTGTGAAGGTTCTGAGAGGGTTGAGAGGCCAGAGACTTACAAGCAATGGCAGGTTCGGAACATAAGGGCTGGATTTAGGCAACTGCCTTTGGATAAACATCTCATTAACAAGTTAAGATGCAAGTTGAAAGATGTGTACCATAGTGATTTCATGCTTGTTGAAGATGGAAACTGCATGCTGCAAGGTTGGAAGGGCCGAATAGTTTACGCTTCCTCCTGTTGGATACCTGCATAG 2223 0.4233 MDPRFNSNHTNNGFKFNQIPNSIDSDDHTFGFIDDLFLLPPPDPNNTSISAITTAEEDSPLDETDFSATVLRYINQMLMEEDMEKKPCMFHDPLALQAAEKSFYEVIGETYPSSYASESPEDSLNSNFSSYSNCGTTTSTSGSSSVEYESYWSNFDVSEYKPSILRTTFPSDFVFQASSMNGTSSSNFGLVNNGFLVSSKDGFPDSNLLSKSESVLQFERGVEEANKFLPKGNPLVIDLDKNNPFIPSFRKAPQEVVVKTESNEGEHFSAEARGRKNHERGDETDLQDERSNKQSAVYIDDTELSELFDKVLLGTGCGKEGAPTCDSKEVKPNGLDMSLQQKEEANNFGGGKGSGKKRGNKKGLVDLRTMLIMCAQSVSSDDRATAKELLKQIRQHSSPLGDGSQRMAHCFANALEARLSGTGTQIYTALYSKRNSSADMVKAYQMFISACPFKKLAIIFANHTILNLAKDVETLHVVDFGIRYGFQWPALIYRLSKRPGGPPKLRLTGIELPQPGFRPAERVQETGLRLARYCERFNVPFEFNAIAQKWETIKVEDLKIQKNELLVANCICRFKNLLDETVVLNSPRDAVLKLIKNSKPNIFIHTTVNGSYNAPFFVTRFKEALFHYSTMFDVLDINVAREDPTRLMYEKEFCGREVMNTIACEGSERVERPETYKQWQVRNIRAGFRQLPLDKHLINKLRCKLKDVYHSDFMLVEDGNCMLQGWKGRIVYASSCWIPA* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4923 740 Pfam GRAS domain family 367 737 IPR005202 -
Psa7g4923 740 MobiDBLite consensus disorder prediction 260 291 - -
Psa7g4923 740 ProSiteProfiles GRAS family profile. 358 738 IPR005202 -
Psa7g4923 740 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 739 IPR005202 -
Psa7g4923 740 PANTHER SCARECROW-LIKE PROTEIN 14 36 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4923 Psa-Chr7 431039224 431042758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4923 70 740 GRAS Transcription Factor Family AT1G07530 55.874 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa7g4923 GRAS 1.2e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4923 - - mtr:MTR_4g064160 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4923 7 431039224 431042758 Psa7g4923 7 431039224 431042758 ECH
Psa5g6549 5 551890734 551894561 Psa7g4923 7 431039224 431042758 ECH
Psa5g6550 5 551901889 551904946 Psa7g4923 7 431039224 431042758 PCT