Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4919 ATGTATGAAACACCTACGGGTTTCTCGTTTCACGGCTTAACGGCTGGTGATGGATTTGTTTGTGGTCTTTTAATGGATTCTAATCAACCTTATTGTTGGGGTAATAGTGGGTACATTCAAATGGGTGTGCCTCAACCTATGATTAGAGAAGCTCAGTACTTGGAAATTAGTGCTGGTGATTACCATGTATGTGGATTGAGAAAGGTTAGGAATAGAAATGTTTCGTTGGTTGATTGTTGGGGGTATAACATGACTGCAAATTACGTGTTTGATGGAATGATTCAATCGATTTCAGCAGGTTCTGCGTTTAACTGTGGGTTGTTTTCGAGCAACGGGAGTGTTTTCTGTTGGGGCGATGAGACTAGTAGCAAGGTGATTAGTTTGATTCCTTCGAAAATGAAGTTTAAAATGATATCGGCTGGCGGGTTTCATGTATGTGGAATCTTGGAAGGGGTGAATTCGAGAACTTTTTGTTGGGGGAGAAGCTTGAACATTGAGGAGCAGATTTCAATGACACATGTAAGTGGTGAAGGAAACGTTGATTTGGCTCCAAATGATCCTATGGTTTCTGTAGTGGGAGGAAGGTTTCATGCTTGCGGAATAAAAAGCTATGATCATAGAGTTATTTGTTGGGGATTTATCATCAAACCAAGCACTTCAGTTCCTAGTGAGGCTAAGGCTTATGAGATTGCAGCTGGTGATTATTTTACTTGCGGAGTACTTGCTGAGAGAAAACCACTTAGGCCGGTTTGTTGGGGCGTCGGTTTTCCCACGTCTCTTCCTTTACCGGTTTTACCAGGACTATGCAAGCCTTCTCCATGTCCGTCTGGTTTCTATGATTTTGATCAGCAAAAGGGTCTCTGCGAGTCTCCAAATTCTGGTCTTTGCAAGCCATGCAGTGGTGATTGTCCTGTTGAAATGTATCAGAAAAATGGATGCAATTTGGAATCTGATAGAGTGTGCGAGTATAACTGTTCGTCTTGTTCTTCACCTGAATGCTTCTCACATTGCTCATCTTCTTATTCCAATACCGGAACAGAGAAGAAAAACGAGAAATTTTGGGCTTTGCAGTTGCCGGTGGTTATCGCAGAGATTGGTTTGGTACTTTTCATAGTCTGTATTGTAATTTTAATAGCGGTTTTATATGTTCACCATAGACTAAGAGACTGTGAGTGTTCAACAAGATTAAAGAAGTTGAAAAAACTCGATGCGAGTTCTTCCCTCCAAAATGAGAACATCAACAAGATTCGTCCGGAAATGGAGGAGTTCAAGCTTAGGAAGGCTCATAGGTTCACCTATAACGAACTTGAAACTGCAACATGTGGATTCAAAGAAGAATCCATAGTAGGAAAAGGAAGTTTTGCTTGTGTTTTCAAAGGTGTTCTAAAAGATGGAACAGTTGTAGCTGTTAAAAGGACTATAGTATCTCTATCTTCTCCTCCCAACAACATGCATAAGAATTTCAAAGAGTTTCACACTGAACTCGATTTGCTCTCAAGATTAAACCATGCTCATTTGCTCAACCTTCTAGGCTATTGCGAAGAAGGCGGAGAGCGGCTTCTTGTCTACGAGTTTATGGCGAATGGATCTTTGTATCAACACCTACATGGAACAAACCAAGGTCTGAAACAGCAGTTAATCTGGATAAGAAGGGTAACGATAGCAGTTCAAGCAGCTCGCGGAATCGAATATTTGCACGTGCCATTGATTAAATCCGGCGATATAGCTGCGATTCTGGATCCGATTCTTAAACCTCCTCACGATCTCGAACCATTGAAAAAGATAGCTAATGTTGCTAGTAAATGTGTGAGAATGAGAGGGAAAGATAGACCTTCCATGGACAAAGTAACAACAGCATTGGAAAGAGCTCTTGCAGAGTTAATGGGCAGTCCATGCATTGAGCAACCGATTTTGCCGTCCGAGGTTGTTTTAGGAAGTAACAGATTGCATAAGAAATCATCACAAATGTCGTCGAATAGGTCTGTTTCTGAAAATGAGGATCAAAGATTTGAGCTTAGAGCACCTTCATGGATAACATTCCCTAGTGTTGCATCTTCTCAAAGAAGATCAATGTCAGAGGTTGATGGTGACGGAAAAGCTATAGAAGTGAAGAATATAGGCAATGTTGGAGGGATCAGTGATGTGTTGAGAAGTTTAGAGGAAGAGATTGGACCTGCTTCTCCACACCAGAGGTCGTTCTTGGAGCACAACTTCTAG 2217 0.4145 MYETPTGFSFHGLTAGDGFVCGLLMDSNQPYCWGNSGYIQMGVPQPMIREAQYLEISAGDYHVCGLRKVRNRNVSLVDCWGYNMTANYVFDGMIQSISAGSAFNCGLFSSNGSVFCWGDETSSKVISLIPSKMKFKMISAGGFHVCGILEGVNSRTFCWGRSLNIEEQISMTHVSGEGNVDLAPNDPMVSVVGGRFHACGIKSYDHRVICWGFIIKPSTSVPSEAKAYEIAAGDYFTCGVLAERKPLRPVCWGVGFPTSLPLPVLPGLCKPSPCPSGFYDFDQQKGLCESPNSGLCKPCSGDCPVEMYQKNGCNLESDRVCEYNCSSCSSPECFSHCSSSYSNTGTEKKNEKFWALQLPVVIAEIGLVLFIVCIVILIAVLYVHHRLRDCECSTRLKKLKKLDASSSLQNENINKIRPEMEEFKLRKAHRFTYNELETATCGFKEESIVGKGSFACVFKGVLKDGTVVAVKRTIVSLSSPPNNMHKNFKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMANGSLYQHLHGTNQGLKQQLIWIRRVTIAVQAARGIEYLHVPLIKSGDIAAILDPILKPPHDLEPLKKIANVASKCVRMRGKDRPSMDKVTTALERALAELMGSPCIEQPILPSEVVLGSNRLHKKSSQMSSNRSVSENEDQRFELRAPSWITFPSVASSQRRSMSEVDGDGKAIEVKNIGNVGGISDVLRSLEEEIGPASPHQRSFLEHNF* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4919 738 ProSiteProfiles Protein kinase domain profile. 443 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4919 738 Gene3D Transferase(Phosphotransferase) domain 1 420 632 - -
Psa7g4919 738 PANTHER RECEPTOR-LIKE KINASE 1 566 - -
Psa7g4919 738 PANTHER RECEPTOR-LIKE KINASE 567 738 - -
Psa7g4919 738 SUPERFAMILY Protein kinase-like (PK-like) 423 566 IPR011009 -
Psa7g4919 738 Gene3D - 3 259 IPR009091 -
Psa7g4919 738 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 567 738 - -
Psa7g4919 738 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 1 566 - -
Psa7g4919 738 SUPERFAMILY RCC1/BLIP-II 8 213 IPR009091 -
Psa7g4919 738 ProSitePatterns Protein kinases ATP-binding region signature. 449 471 IPR017441 GO:0005524
Psa7g4919 738 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 273 321 IPR001368 GO:0005515
Psa7g4919 738 Pfam Protein tyrosine and serine/threonine kinase 446 568 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4919 Psa-Chr7 430388862 430391927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4919 567 738 Receptor kinase-like Gene Family AT3G59420 65.116 3.05e-57 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Psa7g4919 PK_Tyr_Ser-Thr 7.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4919 - - egr:104450962 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4919 7 430388862 430391927 Psa5g6642 5 555670690 555674125 PCT