Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4917 ATGGGGCATAGTTCGAATAAGAAGAAGCGAGGAGGTGGAGGAAGAAGAAACAAGTCAAGAACACCTTCCAAAGACCACACTTCTCAATTCGGAAATGATGGTGATAACGAGCAACTCTCGGAAGAGATTACTGCACTATGTTCGATTTTCCAAGAGGATTGTGAAATTATTCCTGGATCGCCTGCTCAAATTGTTATTAAAATCAGGCCTTACTCCAATGACATGGGTTATGAGGATGTGGATGTTTCTGCTGTTCTTGTTGTTAGGTGCTTGCCTGGGTATCCCTTCAAATGTCCCAAGTTGCAGGTTACTCCTGAAACGGGTTTATCACAAACTGATGCTGATAAACTTTTGGCTCTCCTTGTTGATCAGGCCAATTTAAATGCTAGGGAGGGACGAGTAATGATCTTTAATTTAGTTGAGGCTGCTCAAGAATTTCTGTCTAGAATTGAGCCTATTGCCAAACCAACTGAATCTAAGTTTTTACACAAAACTAGAGAAGGCATTGAAGAATTGTGTCCCAAAGATATGGCATCTTCAAATAAGAATAGATCTTTTGTTTATGGTTTCGTTGACCTTTTCAGTGGCTATGGAGAGTCCTGGAATTGGGGATTTGGAATTGATGAAACTGCTGTAAAAAGTTCTTCTATTCCTTCCTCTAAGTTGGATGCCTCCACACTACGAATAGAAACCCGGGAAAAGAAATCCGATTGCAAGGAAAACCTGTTCATATTGCAAGAACTACCTGTCAAATTAGATACTGTAGGAGAAGTTAGTGAAGAGAGTAACAATTGTTTATCTTTGACACGTTCAAGTAGGTCTCTGGTGGGTGAATCTATAGGGGACGACAATGAAGGTGAGAAAGAGTATTTAATGGTTGACGAGTATACAACAGAGGAAAGCAAAGGTATATCTGACAGCGAGTCTACAGAGTCTCTATCTTCTGTGTCCTTGCCTCATCACCAGGCATCTCAAATAATAGAAAAGGATCTAATAATGGTTCACTTACTTCGCCTTTCTTTGGCCTCTCAAGGCACATTGGCCGACTCTTGGCCGCAATTAGTAACAGAGCTGTACAATTCAGGGATTGTTTCTGACTCGACACGTGATATGGCATCAAAGCCGCTTTCTCTTTTCAACAAAACCTTTGATCATATCGTCAAGAAACAACCGGCATTATCCAAAATACTTCAATTGGGGATACCTGATCTTGGAGGCTCTAATACCATTCGCCATAGTTCTCGATATTTAAATGATTTTGAGGAGCTACGCCCCCTTGGTCATGGTGGTTTTGGTCACGTTGTGCTGTGCAAAAATAAACTCGATGGAAGGCAGTATGCAATGAAGAAAATTCGCCTTAAGGACAAAACCATGACTAACCGAATATTGAGGGAAGTAGCTACACTTTCTCGTTTACAACATCAACATGTTGTTCGATATTATCAGGCATGGTTTGAAACTGGAGTGACTGATTCTTATGGTGATCTTGCCGGAGATTCAAGAACTCCAGCGAGCTCTACTTTCAGTTACAAAGGAGCAACCTCCAATGATGCTATTGGGCGTGAGAATCAGCTTGAATCAACATATCTTTATATACAAATGGAGTACTGTCCCTTGACTCTTCGGCAGATGTTTGAATCATATAGTCATTTTGACAAAGAACTGGCATGGCATTTGTTTCGCCAAATAGTAGAAGGTTTGGCACACATACATGGGCAAGGAATAATTCATCGGGACTTAACACCAAGTAACATATTCTTTGATGCTCGCAATGATATCAAAATCGGTGACTTTGGTCTTGCCAAGTTCTTGAAGTTGGAGCAGGTGGATCAAGATCCAGCCCATCTTGCTGATACAACTGGAGTTTCCATCGATGGCACTGGACAAGTAGGGACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCTAAGATTGATGAAAAGGCTGACATGTACAGCTTAGGAGTAATTTTCTTTGAGCTTTGGCATCCATTTGGGACAGCAATGGAGAGGCACGTTGTTTTATCCGATCTGAAACAAAAAGCAGGGCTTCCACCTGCTTGGGTTGCTGAGTTTCCAGAACAGGAATTCTTGCTGCGGCAGTTAATGTCTATAGGTCCCTCAGATCGCCCATCTGCTACAGAACTTTTGAAGAACGCATTTCCTCCACGAATGGAGTCTGAATTTTTCGATGATATGTTGCGAACAATGCTGAAATCAGAAGATAGAAGCATTTATGATAAAGTTTTAAATGCTATCTTTGATGAAGAAATGTTAAGCTCAAAGCACATTCATCAAGTTGGTAGATTAGAGTCGGTTGAAGATAACAATTCGTCCATTCAGCACACAGATTTTGTAACCCAGGTCCGAGATGACGTTTTAGATGTCAGCAAGGATATTTTCAGACAACATTGTGCTAAACACCTAGAAATATCACCGATTCGTTTATTGGATGATTGTCCACAGTTTAATAGAAATGCAGTTAAACTTCTTACCCATGGAGGAGACATGCTTGAACTTTCTCATGAACTGCGTTTGCCTTTTGTGAATTGGATCATATCTAACCAGAAATCTTCATTCAAAAGATATGAGATATCACACGTATACAGAAGAGCAGTTGGGCATTCATCACCAAACAGCTACCTTCAGGGAGATTTTGACATTATTGGTGGCACTTCAGTATTGACAGAGGCAGAGGTCATAAAGGTCACGAAGGACATAATCACTTGTTTTTTCCATGAAGACTCATGCGACATTCATCTAAACCATGCTGACATCCTGGGTGCAATTTGGTCATGGACTGGAGTCAAGGTAGAGCACAGACTTAAAGTAGCAGAGCTTCTTTCAATGATGAGTTCTTTGCGTCCTCAATCCTCAGAAAGGAAATCAAAATGGGTAGTGATAAGGCGGCAGCTTTTGCAGGAACTGGGTTTAGTTGAAGCTATGGTAAATAGGTTGCAGACTGTAGGTTTGAGATTTTGTGGATCTGCAGATCAGGCACTTCCCAGACTAAGGGGAGCTCTACCATCTGATAAGCGTACCTTAAAGGCACTTGATGAATTGTCTGAGCTTGTCCGTCTCTTGAGAATTTGGAAGATTGACAAAAATGTATATATAGATGCATTAATGCCGCCAAATGAAAGTTATCATAGAGATTTGTTTTTTCAGGTATACTTGAGGAAGGAGAACAGTTCTGGATCACTCTCTGAGGGTGTCTTGCTAGCTGTTGGTGGTCGATATGACTATTTGCTTCATCAGTTGAGGAGTAGTGACTATAAAGGAAATCCCCCCACCGGTGTGGGAACTAGTCTTGCCCTAGAGACAATAATTCAGAATTGTTCTGTACCCAATCGAAATGAAGCCAGTATCAATATTCTTGTGTGCTCAAAAGGAGGAGGTATTCTTGTTTGCTCGAGAGGAGGAGGCGGTCTGATGGTGGAGCGCATGGAACTAGTTTCTGAATTATGGCAGGAGAACTTTAAGGCCGATTTTGTCCCCATCCCTGATCCAAGTCTTACAGAGCAATATGAGTACGCAAATGAACATGATATCAAATGTCTCGTTATTATTACGGATGCAGGTTTCTCCCTGACTGATTCAGTTAAGGTTCGACATCTTGAACTTAAGAAGGAGAAAAATGTTGAGAGAGAGAACCTAGTCAAGTTTCTATCAGATGCTATGGCAACACAATTTAGAAACCCCTCCATATGGATTTGA 3723 0.4118 MGHSSNKKKRGGGGRRNKSRTPSKDHTSQFGNDGDNEQLSEEITALCSIFQEDCEIIPGSPAQIVIKIRPYSNDMGYEDVDVSAVLVVRCLPGYPFKCPKLQVTPETGLSQTDADKLLALLVDQANLNAREGRVMIFNLVEAAQEFLSRIEPIAKPTESKFLHKTREGIEELCPKDMASSNKNRSFVYGFVDLFSGYGESWNWGFGIDETAVKSSSIPSSKLDASTLRIETREKKSDCKENLFILQELPVKLDTVGEVSEESNNCLSLTRSSRSLVGESIGDDNEGEKEYLMVDEYTTEESKGISDSESTESLSSVSLPHHQASQIIEKDLIMVHLLRLSLASQGTLADSWPQLVTELYNSGIVSDSTRDMASKPLSLFNKTFDHIVKKQPALSKILQLGIPDLGGSNTIRHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAMKKIRLKDKTMTNRILREVATLSRLQHQHVVRYYQAWFETGVTDSYGDLAGDSRTPASSTFSYKGATSNDAIGRENQLESTYLYIQMEYCPLTLRQMFESYSHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLKLEQVDQDPAHLADTTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVIFFELWHPFGTAMERHVVLSDLKQKAGLPPAWVAEFPEQEFLLRQLMSIGPSDRPSATELLKNAFPPRMESEFFDDMLRTMLKSEDRSIYDKVLNAIFDEEMLSSKHIHQVGRLESVEDNNSSIQHTDFVTQVRDDVLDVSKDIFRQHCAKHLEISPIRLLDDCPQFNRNAVKLLTHGGDMLELSHELRLPFVNWIISNQKSSFKRYEISHVYRRAVGHSSPNSYLQGDFDIIGGTSVLTEAEVIKVTKDIITCFFHEDSCDIHLNHADILGAIWSWTGVKVEHRLKVAELLSMMSSLRPQSSERKSKWVVIRRQLLQELGLVEAMVNRLQTVGLRFCGSADQALPRLRGALPSDKRTLKALDELSELVRLLRIWKIDKNVYIDALMPPNESYHRDLFFQVYLRKENSSGSLSEGVLLAVGGRYDYLLHQLRSSDYKGNPPTGVGTSLALETIIQNCSVPNRNEASINILVCSKGGGILVCSRGGGGLMVERMELVSELWQENFKADFVPIPDPSLTEQYEYANEHDIKCLVIITDAGFSLTDSVKVRHLELKKEKNVERENLVKFLSDAMATQFRNPSIWI* 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4917 1240 Pfam Anticodon binding domain of tRNAs 1136 1232 IPR024435 -
Psa7g4917 1240 SUPERFAMILY Class II aaRS ABD-related 1137 1230 - -
Psa7g4917 1240 SUPERFAMILY Class II aaRS and biotin synthetases 790 1113 IPR045864 -
Psa7g4917 1240 ProSiteProfiles RWD domain profile. 41 150 IPR006575 GO:0005515
Psa7g4917 1240 PANTHER EIF-2-ALPHA KINASE GCN2 22 1135 - -
Psa7g4917 1240 PANTHER EIF-2-ALPHA KINASE GCN2 1136 1240 - -
Psa7g4917 1240 Gene3D Transferase(Phosphotransferase) domain 1 540 731 - -
Psa7g4917 1240 MobiDBLite consensus disorder prediction 1 17 - -
Psa7g4917 1240 ProSiteProfiles Protein kinase domain profile. 420 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4917 1240 MobiDBLite consensus disorder prediction 1 35 - -
Psa7g4917 1240 ProSitePatterns Tyrosine protein kinases specific active-site signature. 575 587 IPR008266 GO:0004672|GO:0006468
Psa7g4917 1240 PANTHER HISTIDYL-TRNA SYNTHETASE 22 1135 - -
Psa7g4917 1240 PANTHER HISTIDYL-TRNA SYNTHETASE 1136 1240 - -
Psa7g4917 1240 CDD STKc_EIF2AK4_GCN2_rpt2 413 720 - -
Psa7g4917 1240 Gene3D - 1135 1230 IPR036621 -
Psa7g4917 1240 Gene3D Bira Bifunctional Protein; Domain 2 784 1120 IPR045864 -
Psa7g4917 1240 ProSitePatterns Protein kinases ATP-binding region signature. 426 449 IPR017441 GO:0005524
Psa7g4917 1240 SUPERFAMILY Protein kinase-like (PK-like) 416 727 IPR011009 -
Psa7g4917 1240 Pfam Protein kinase domain 420 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4917 1240 Gene3D Ubiquitin Conjugating Enzyme 30 156 IPR016135 -
Psa7g4917 1240 SMART RWD2001b 41 150 IPR006575 GO:0005515
Psa7g4917 1240 Pfam RWD domain 37 147 IPR006575 GO:0005515
Psa7g4917 1240 Pfam Histidyl-tRNA synthetase 872 1111 IPR041715 -
Psa7g4917 1240 Gene3D Phosphorylase Kinase; domain 1 408 536 - -
Psa7g4917 1240 SUPERFAMILY UBC-like 36 147 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4917 Psa-Chr7 430321967 430340460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4917 420 723 MAP Kinase Kinase Kinase AT1G63700 25.796 8.25e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Psa7g4917 Pkinase 4.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4917 K16196 - gmx:100797996 1986.46