Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4892 ATGGACACAGAAAAATCAATAGAAGACCAATTCTCCAAGCTACATCCTTCTTTACCAGAAAACACAAGAATCGGAATAATCGGTGCCGGTCCAAGCGGCTTATCAGCTGCTTATGCATTAGCCAGGCTTGGTTATAAGAATGTTACAGTCTTGGAGAAACATCACACAGTTGGTGGCATGTGTGAATCAGTAGAAATTGAAGGAAATGTTTATGATTTGGGAGGACAAGTTCTTGCTGCAAGCAGTGCTCCGGTGATCTTTCATTTGGCGAAAGAGACGGGTTCGGCATTCGAAGAAATGGATTCGCACAAGCTTGCCGTTGTTGATCATTCTTCAGGAGAATATCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTGGAAATACAAAATTGTGGTCGAATCGGGGTTCACGCTGTTAGCGACATTGCTTCGGACTTAACTCCGGAGTATGTAGAGTGTCATGGACTCAAATCTGTTCCTAAATCTGTAGCTTATGGTTACACTGCTTCAGGATATGGGTTTGTTCAAGACATGCCTTATGCATACCTTCATGAATTTACTCGAACATCAATGGCCGGAAAAATACGACGATTTAAAGATGGATATACAAGTCTTTGGAAGAAGATAGCTGAATCACTTCCTTTGAGACTTCTATGTAACACTGAAGTACTGTCAATCAAGCGGAACTCAGACAGGGTCATGATCATAATTTCTGGTTCATTTCCATTAAATTATGGAAGAATTTACCGATCACCTTCTACTTTCATAGAATGCGAAAAAGAAGTGATGGATGCAAGTGACCTTGAAAAGGATTTATTCAGCAAAGTCGAGACAAACGACTACTACACCACTGTTTTGAAGATCAAAGGGCTCGAACATTTTCCTATTGGATTTTATTATTTTAGTAAATATATGGAAGATCCCAGCACAATAGGAAATCCAGTTGCAATGCAGAAATTTTATGATGACAGTAATATATTCTTGTTCTGGTCCTACGGAAACTCGGTTGACATTAAAGGACCAACTGTCAAGGAGCTCGCAATGAAGACAGTAGAAGCCATGGGAGGAGAAGTCGAGAGTTTCATTCTTCAACGCTGCTTTAAATATTTTCCTCATGTTAGCAGCCAAGATATGAAAGATGGATTCTATGAAAAGTTTGAATCAGAGCTTCAAGGATCAAATTGTACTTATTATGTAGGTGGGCTTATGGCATTTGAGCTTACAGAAAGGAACTCATCTTATGCCATGGCTCTAATTTGCAAGAACTTTGCCAATAGAAATGATTTGCCAACATTTCCTTACACTAAGAATTTGTTTCCCTTGCAAACTGAGCTACAGAAGAAGAACCCTAGAGAATTAGATGAATTGCCAGAAGTGAAATTTCCTAATTTGCCTACTTTGAATAGCTACTTAAAGTACTGGGGGACTCATCCAATCACTCAAAATAGGACTCTTTACACATGGACTAATGAAGAAGGGAATCCTGTGAGCCGCAGGACCTTTCGAGAACAACATTTTTATTCTTCTTGTGTTGCTCACAAGCTCTTGACGAGCCAAAATCCAGTTATCAAGCCCGGTGACCGAGTTCTGCTCGTCTACGTCCCCGGTTTAGATTTTATAGATGCGTTCTTTGGATGCATAAGAGCTAGAGTCTTGCCGGTCCCAATTATTCCCCCGGATCCCATGCAAAGAAGTGGACAGGCGCTAATGAAAATTGAAAGCGTTGCAAAATCATGTGGCATTGTCGCGATTTTGTCAACAATAGCTTATCACTCAGCCGTCCGTGCAGGTTCATTGAAAAATTTGATTTCACTAACACGGAAAAATGGGAAGTCATCCAGCCGTTGGCCAAATCTTCCGTGGTTGCATACTGATACCTGGGTCAAGAATTCTAAGAGCATTGTTTTGGAGCATCTTGATGATCAAAACGAACCACATCCTGACGATACATGTTTCTTGCAGTTTACCTCGGGATCAACTGGTGATGCTAAAGGAGTCATGATCTCTCATGGAGGGCTAATTCATAATGTGAAGTTGATGCAAAGTAGATACAAAAGTACCTCAAGGACTAAACTGGTAAGTTGGCTTCCTCAGTATCATGATATGGGGCTTATTGGAGGACTTTTTACCTCTCTTGTTAGTGGTGGATCTGCGATTTTATTTTCACCAATGACATTTATCAAGAAGCCAATGTTATGGCTTGAAATCATCAGCAAGTATCAAGCAACTCATAGTGCCGGCCCTAACTTTGCCTTCGAGTTACTGATTCGAAGATTAGAGTCTGACAAGGATAAGATACGGAATTTAGACCTTTCATCTTTGGTTTTTCTTATGGTTGCGGCTGAACCAGTGAGACAGAAGACCCTGAAAAGATTCATTGAGTTAACAACTCCTTTCGGCTTATCTCAAAAGGTGATGGCTCCTGGATACGGCTTGGCAGAAAATTGTGTATTTGTAAGCTGTGCATTTGGAGAAGGTAAGCCTATTATTGTTGATGGGCACGGAAGAGTTTGTTGTGGGTATGTTCGTCCAGCGGATAAAGATATCGACATTAGAATTGTTGATCCAGACACTTGCGAAGAGTTTCGTGAAGACGGGACAGAGGGAGAAATCTGGATTAGTAGTCCAAGTGCAGGAGTAGGATACTGGGGAAGGGAAGAATTGAGTCAGAAAACTTTCAGGAATGAACTTACAAATCATCCCGGACGTAACTACACAAGAACCGGAGACTTGGGACGAATAATAGATCAGAAGCTATTCATCACTGGAAGAATCAAGGATCTTATCATTGTTGCGGGAAGAAACATTTACTCGTCTGACGTGGAAAAGACAATTGAGACTTCATCTGAATTTCTGCGTCCTGGTTGTTGTGCTGTCATTGGTGTCCCTGAGGAAATTCTATCAGCAAAAGGGATTTCCATTCCAGATGGCTCTGATCAGGTTGCCTTGGTTGTGATTGCAGAAGTAAGGGATGGTAAGCCAGTTAGCAAGGATGTGATCGACAGCATAAAGATGCGTGTGGCAGAAGAACATGGAGTCAGTCTTGCTTCGGTCAAGTTGATAAAGCCTAGAACCATCAGCAAAACTACATCGGGAAAGATCAAGAGATTTGAATGTATCAAACAATTTACAGACGAGACACTGCACTTGGTACCTCTACGTACAAAACCTACGATGACAAAGAAATCTAAGGTATGGTCATTTACTACATCAACCTTCCGAGCAGAAAAAACGTTCCAACTACAGCTAGTAAAAAGTGCACCTGCAGATAGTAAGAGGATCAATAAAAGTGACATTGTAGAGTTTCTGAAAGTTCTTATTTCTGAGCAGACTGGAATACCAATCAACAACGTCTCAGTCACAGACAACCTCACATCCTACGGAATTGACTCAATTGGTGTCGTTAAAGCAACTAAAAAACTCTCAGATTTCCTTGGAACACCAGTTGCAGCTATTGATGTTTTCACTGCATCATGCATCCTTGAATTGGCTAGCTTCTCAGAGGATCTTCTGTCAAAGACTCAGCCTCAGATGGCGAGAAGTATACCTGTCCCTATTAAAAGGATCAACAAGAACGACATCGTAGAGTTTTTGAAAGTGCTTATCTCTGAGCAGACTGGAGTACCAATCGACAACATCTCAGTCACAGACAACCTGACATCCTATGGAATCGATTCAATTGGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTTCTTGGAACACCAGTTGCAGCAATAGATGTTTTCACTGCGTCCTGCATTCAAGAATTAGCTAATTTCTCTGAAGATCTTCTATCAAAGACTCAGACTCAGCTTTCAAACAATCCACCCGATGTTCCAGAAGCGGAAATTGATTCAACTGAATCAGTTGTGGAGGTATCCAAGTCTCGTCAGTTGGGTATCCGTTTACTTCAATTCCTGGCTCTTATTTATATCTCAATCATGCTGGCCTCTCCTGCTTATCTATCCATAACTGCTTTTTTAAACTCCAGCCTATGTGCCAATAAATCAGTAGCTGGAGTTCCTTGGTTAAATTACATAATTTCGCTGGTTTTTGCACCTCTTGCTTGGATTCTTTGCATTGCTTCTACTTGCATTTGCATTTCAGTGTTTGGAAGTTCTTTATTGGGGCTAAACTATGATCTTACCTCGGAAATCTCCATCTATTCAATGGATTTTGTCAAGTGGTGGGCACTATATAAGACTCAAGAAATTTCCTCTAAAATTTTGGCAACACATCTCAGAGGAACAGTGTTTCTGAACTATTGGTTTGAGATGTTGGGTGCAAGAATTGGATCATCAGTTCTTCTTGATACAGTTGACATCACAGACCCGGCTCTGGTGTCAATCGGAGACGAAGTTATTGTTGCGGAAGGTGTTTTGGTTCAAAGCCATGAGGTAAAGAAAGGAGTTCTAAGTCTCCACCCCATTAGGATTGGAAATTGTTCTTCTATTGGACCTTATGCTGTTGTTCAAAAAGGAAGTGTTGTTGGAGAAAGTGTTGAACTACAGGCTTTGCAAAAGGTTGGAGGAGGTGAACATGTGCTAAAGCCAAATAACCTTGATAATATTGATAAGAATGCAGATCTTCCTGTTATTAACAGCAAAACTCAATATGATACCATCTACCACTTTATGGGGATCTATCTTGTTGGTTTTCTCTCCTCACTTGCTGCAGCCATTGCATATTTCTTATATATCAAATTCTCCAAGCATCCTCCATCACTCCAACACTTTTCATTTGTTTGCATATGTGGCGCTTTTCACTGGATCCCGTTTACCGTCATTGCATATGCTTCCATGTTCTATGATGTCCCATCAAACCCCATCACCTTTGCCATTTCATTTACTGGCGCCTACTTGCTTCATAGTCTCATACTCATCATTCTAACCGCTGTTCTCACTCGTCTCCTCATACGTAACCAAAACCAAACCGAATTCAAAACCTGGCTTCAATGCCGAATGAACATTTCCTGCCACCTTAGATGTGCTAAGCTTCTCTCAGGAACAGAAGCCTTCTGCGTATATTTACGCATTATGGGAGCAAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAACCCAGTTTCAAATCCAGAGTTAATGTCAATTGGCGCCGGAGTCCATCTAGGAGATTTTAGCAAAATGATTACAGGGTTTCATTCTTCCAACGGATACACTCGTGGAAAAATCGAGGTTCAAGACAACTCGGTTATTGGAAGTCAAAGCCTAATTCTCCCTGGTTCTCTCATCCAAAAGAATGTGATCCTTGGTGCACTTTCAGTAGCTCCAATGAATTCTACACTCCAAGAGGGTGGTTTATATATTGGTTCACAATCCCATATAGCTAACTTAACTTCACCATTGCACAAACAAGACTCACCAAAAGTAACCTTCACATTGACAAGGAAATGGTATCAAACCTTCTCATCACTTTTCATTCAGCCATTTCTACAGACAGTTTTACCTCATATCTTACTAGGATTAGCAATTTATGCTCCTTTGAACTTGATTTTCCACCTAAAGAACATCAAAAAAGTTCCAATCTTTTGGCTACTTCCTTTGATATGGATTCTCTCAGGTACTATGGCTGCATTAACATGTGTTATAGCGAAATGGGTTCTTGTAGGAAGGAAGAAAAAAGGCGAAGAAGTGTCTATATGGAGTAAAAGCATAATCTTGGATAGTACATGGCAAGCTATAAGAACATTAACAGGTGATTATTTCATGGAAATGACATGTGGGTCATTTATGTTTGTGAAATGGATGAAGGTGATGGGTGTTGATGTAGATATGGATGATGGTGATGTTTATGTTGATAGCATGGGAGCATTGTTGAACCCTGAGATGGTGAAGATAGAGAGAGGTGGTTGTGTGGGAAAAGAAGCATTGTTGTTTGGACATATATATGAAGGTGATGAAGGAGGGATGGTAAAGTTTGGAGAGATTAAGGTTTGTGAAGATGGGTTTGTTGGGAGTAGAGCTATGGTTATGCCTGGTGTGAGATTGGAGAATGGGGCTAATGTTGGTGCTTTGTCACTTGTAATGAAAGGAGAAGTTGTTAGGTCAAGGTGA 6096 0.4062 MDTEKSIEDQFSKLHPSLPENTRIGIIGAGPSGLSAAYALARLGYKNVTVLEKHHTVGGMCESVEIEGNVYDLGGQVLAASSAPVIFHLAKETGSAFEEMDSHKLAVVDHSSGEYQDIKVADDYVSVMSLTLEIQNCGRIGVHAVSDIASDLTPEYVECHGLKSVPKSVAYGYTASGYGFVQDMPYAYLHEFTRTSMAGKIRRFKDGYTSLWKKIAESLPLRLLCNTEVLSIKRNSDRVMIIISGSFPLNYGRIYRSPSTFIECEKEVMDASDLEKDLFSKVETNDYYTTVLKIKGLEHFPIGFYYFSKYMEDPSTIGNPVAMQKFYDDSNIFLFWSYGNSVDIKGPTVKELAMKTVEAMGGEVESFILQRCFKYFPHVSSQDMKDGFYEKFESELQGSNCTYYVGGLMAFELTERNSSYAMALICKNFANRNDLPTFPYTKNLFPLQTELQKKNPRELDELPEVKFPNLPTLNSYLKYWGTHPITQNRTLYTWTNEEGNPVSRRTFREQHFYSSCVAHKLLTSQNPVIKPGDRVLLVYVPGLDFIDAFFGCIRARVLPVPIIPPDPMQRSGQALMKIESVAKSCGIVAILSTIAYHSAVRAGSLKNLISLTRKNGKSSSRWPNLPWLHTDTWVKNSKSIVLEHLDDQNEPHPDDTCFLQFTSGSTGDAKGVMISHGGLIHNVKLMQSRYKSTSRTKLVSWLPQYHDMGLIGGLFTSLVSGGSAILFSPMTFIKKPMLWLEIISKYQATHSAGPNFAFELLIRRLESDKDKIRNLDLSSLVFLMVAAEPVRQKTLKRFIELTTPFGLSQKVMAPGYGLAENCVFVSCAFGEGKPIIVDGHGRVCCGYVRPADKDIDIRIVDPDTCEEFREDGTEGEIWISSPSAGVGYWGREELSQKTFRNELTNHPGRNYTRTGDLGRIIDQKLFITGRIKDLIIVAGRNIYSSDVEKTIETSSEFLRPGCCAVIGVPEEILSAKGISIPDGSDQVALVVIAEVRDGKPVSKDVIDSIKMRVAEEHGVSLASVKLIKPRTISKTTSGKIKRFECIKQFTDETLHLVPLRTKPTMTKKSKVWSFTTSTFRAEKTFQLQLVKSAPADSKRINKSDIVEFLKVLISEQTGIPINNVSVTDNLTSYGIDSIGVVKATKKLSDFLGTPVAAIDVFTASCILELASFSEDLLSKTQPQMARSIPVPIKRINKNDIVEFLKVLISEQTGVPIDNISVTDNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTASCIQELANFSEDLLSKTQTQLSNNPPDVPEAEIDSTESVVEVSKSRQLGIRLLQFLALIYISIMLASPAYLSITAFLNSSLCANKSVAGVPWLNYIISLVFAPLAWILCIASTCICISVFGSSLLGLNYDLTSEISIYSMDFVKWWALYKTQEISSKILATHLRGTVFLNYWFEMLGARIGSSVLLDTVDITDPALVSIGDEVIVAEGVLVQSHEVKKGVLSLHPIRIGNCSSIGPYAVVQKGSVVGESVELQALQKVGGGEHVLKPNNLDNIDKNADLPVINSKTQYDTIYHFMGIYLVGFLSSLAAAIAYFLYIKFSKHPPSLQHFSFVCICGAFHWIPFTVIAYASMFYDVPSNPITFAISFTGAYLLHSLILIILTAVLTRLLIRNQNQTEFKTWLQCRMNISCHLRCAKLLSGTEAFCVYLRIMGAKIGKHCSIRAINPVSNPELMSIGAGVHLGDFSKMITGFHSSNGYTRGKIEVQDNSVIGSQSLILPGSLIQKNVILGALSVAPMNSTLQEGGLYIGSQSHIANLTSPLHKQDSPKVTFTLTRKWYQTFSSLFIQPFLQTVLPHILLGLAIYAPLNLIFHLKNIKKVPIFWLLPLIWILSGTMAALTCVIAKWVLVGRKKKGEEVSIWSKSIILDSTWQAIRTLTGDYFMEMTCGSFMFVKWMKVMGVDVDMDDGDVYVDSMGALLNPEMVKIERGGCVGKEALLFGHIYEGDEGGMVKFGEIKVCEDGFVGSRAMVMPGVRLENGANVGALSLVMKGEVVRSR* 2032
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4892 2031 Pfam Phosphopantetheine attachment site 1204 1267 IPR009081 -
Psa7g4892 2031 Pfam Phosphopantetheine attachment site 1109 1171 IPR009081 -
Psa7g4892 2031 ProSitePatterns Phosphopantetheine attachment site. 1132 1147 IPR006162 -
Psa7g4892 2031 SUPERFAMILY ACP-like 1196 1278 IPR036736 -
Psa7g4892 2031 Pfam NAD(P)-binding Rossmann-like domain 26 92 - -
Psa7g4892 2031 SUPERFAMILY Trimeric LpxA-like enzymes 1682 1786 IPR011004 -
Psa7g4892 2031 SMART Phosphopantetheine attachment site 1106 1177 IPR020806 GO:0031177
Psa7g4892 2031 SMART Phosphopantetheine attachment site 1201 1272 IPR020806 GO:0031177
Psa7g4892 2031 Gene3D Hexapeptide repeat proteins 1896 2028 - -
Psa7g4892 2031 Gene3D - 459 931 IPR042099 -
Psa7g4892 2031 SUPERFAMILY FAD/NAD(P)-binding domain 20 243 IPR036188 -
Psa7g4892 2031 PRINTS Adrenodoxin reductase family signature 23 45 - -
Psa7g4892 2031 PRINTS Adrenodoxin reductase family signature 47 60 - -
Psa7g4892 2031 SUPERFAMILY Acetyl-CoA synthetase-like 472 1054 - -
Psa7g4892 2031 ProSiteProfiles Carrier protein (CP) domain profile. 1198 1272 IPR009081 -
Psa7g4892 2031 Gene3D - 932 1060 IPR045851 -
Psa7g4892 2031 ProSiteProfiles Carrier protein (CP) domain profile. 1103 1177 IPR009081 -
Psa7g4892 2031 SUPERFAMILY ACP-like 1101 1190 IPR036736 -
Psa7g4892 2031 Gene3D - 94 198 - -
Psa7g4892 2031 Pfam AMP-binding enzyme 501 937 IPR000873 -
Psa7g4892 2031 Gene3D - 23 425 IPR036188 -
Psa7g4892 2031 Gene3D - 1190 1270 IPR036736 -
Psa7g4892 2031 Gene3D - 1092 1175 IPR036736 -
Psa7g4892 2031 SUPERFAMILY Trimeric LpxA-like enzymes 1422 1519 IPR011004 -
Psa7g4892 2031 ProSitePatterns Putative AMP-binding domain signature. 659 670 IPR020845 -
Psa7g4892 2031 Gene3D - 282 375 - -
Psa7g4892 2031 SUPERFAMILY Trimeric LpxA-like enzymes 1876 2025 IPR011004 -
Psa7g4892 2031 CDD FAAL 488 1051 IPR040097 GO:0008610
Psa7g4892 2031 Gene3D Hexapeptide repeat proteins 1408 1513 - -
Psa7g4892 2031 ProSitePatterns Phosphopantetheine attachment site. 1227 1242 IPR006162 -
Psa7g4892 2031 PANTHER AMINE OXIDASE 1 1186 - -
Psa7g4892 2031 PANTHER AMINE OXIDASE 1795 2031 - -
Psa7g4892 2031 PANTHER AMINE OXIDASE 1187 1790 - -
Psa7g4892 2031 PANTHER AMP-BINDING ENZYME 1187 1790 - -
Psa7g4892 2031 PANTHER AMP-BINDING ENZYME 1795 2031 - -
Psa7g4892 2031 PANTHER AMP-BINDING ENZYME 1 1186 - -
Psa7g4892 2031 Gene3D Hexapeptide repeat proteins 1660 1784 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa7g4892 Psa-Chr7 428418081 428429666 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4892 654 970 Monolignol Biosynthesis Gene Families AT1G20480 27.358 2.19e-21 99.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4892 - - cam:101499614 3474.49
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4892 7 428418081 428429666 Psa7g4892 7 428418081 428429666 ECH