Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4876 ATGGATCATGAAAAGACTGAATGCCAAGCTCCCCCCGAAGGTCCTATATTGTGCATTAACAACTGTGGATTTTTCGGAAGTGCAGCTACAATGAACATGTGTTCTAAGTGCCACAAAGACATGATGTTGAAACAGGAGCAGGCCCAGCTCGCAGCATCATCCCTTGGAAGTATTATGAATGGTTCTACAAGTGAAACTGAAAAAGAACCTGTTGTTGCTGCCGATGTGGATATCCCAGCCATTTCAGTGGAACCAAAAACAATCTCCAAGCCATTTTTATTTGGCTCAACTTCAGAGGAGAGTGGTGATTCAAAGCCAAAGGATGGTCCGAAGCGTTGCAGCAACTGCAACAAGCGAGTTGGTTTGACAGGGTTCAATTGTCGATGTGGTAACCTTTTCTGTGCTGTGCATCGCTACTCAGACAAGCATGATTGCCAGTTTGATTATCGCACTGCTGCACGAGAGGCCATAGCTAAAGCAAACCCAGTTGTCAAAGCTGAGAAGCTTGACAAGATTTAA 519 0.4489 MDHEKTECQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMMLKQEQAQLAASSLGSIMNGSTSETEKEPVVAADVDIPAISVEPKTISKPFLFGSTSEESGDSKPKDGPKRCSNCNKRVGLTGFNCRCGNLFCAVHRYSDKHDCQFDYRTAAREAIAKANPVVKAEKLDKI* 173
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4876 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 54 - -
Psa7g4876 172 Gene3D - 1 66 - -
Psa7g4876 172 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Psa7g4876 172 SUPERFAMILY AN1-like Zinc finger 96 167 IPR035896 -
Psa7g4876 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Psa7g4876 172 Pfam AN1-like Zinc finger 113 149 IPR000058 GO:0008270
Psa7g4876 172 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Psa7g4876 172 Gene3D - 95 168 IPR035896 -
Psa7g4876 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Psa7g4876 172 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Psa7g4876 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 172 - -
Psa7g4876 172 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 1 172 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Psa7g4876 Psa-Chr7 424986466 424989370 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4876 4 172 C2H2 Transcription Factor Family AT3G52800 42.012 1.36e-38 128
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4876 - - gmx:100500070 303.908