Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4854 ATGGCTTCCATACCTCTCACCACCGCCACCACTGCAACCACCCTCCCATCTCTCCGTCTCCGCTCATCTCCGCCACTTCGCCGACTCCAATCCAACAACGCTTTCAAACCTCTCAAATCAATTCGCCACTCTTCCATTTCCTCCTTCTCACCTCTCCCACTCTCTAACCTCATTTCCAAACGCCAAACACTCACTGTTAAGGCTTCATCAGCCTCCATCACACCAGCTCCATCTCCGGCTCCGGCTCCGGTTCCGGCCGTGCCATGGCAAGGCGCCGCGATAAAACCTCTCTTAGCATCTATAGCAACCGGAGTTATAATCTGGTTTCTTCCCACTCCCGAAGGTGTATCCAGAAACGCATGGCAATTGCTCGCCATTTTCTTAGGAACTATCGTCGGAATCATCACACAGCCATTACCTCTTGGTGCCGTTGCAATTTTGGGATTAGGAGTTTCGGTTCTCACCAAAACCCTACCCTTCGTTGCTGCATTCTCCGGCTTCGGCGATCCAATTCCATGGCTGATTTGTCTTGCATTTTTCTTCGCTAAGGGTTTTATCAAAACCGGACTAGGTAACCGCGTCGCTTATCAATTCGTTTCGCTTTTCGGTAGTTCTTCGTTAGGGTTAGGTTATAGTTTGGTTTTCAGTGAAGCTCTATTGGCACCTGCAATTCCCTCTGTTTCTGCTAGGGCTGGTGGAATTTTTCTTCCATTGGTTAAGTCTCTGTGTGTTGCTTGTGGAAGTAATGTTGGTGATGGAACGGAGAACAAGCTTGGGTCGTGGTTGATGCTTACTTGTTTTCAGACTTCATGTATTTCATCGGCTATGTTTTTGACTGCAATGGCGGCGAATCCGCTGTGTGCAACTCTTACTTTGAATTCAATTAACCAGACAATTGGGTGGTTGGATTGGGCTAAAGCTGCTATTGTGCCTGGTTTGGTGTCGTTGGTTTTGGTGCCGTTGATTTTGTATATTATATACCCTCCTACCATGAAATCTAGTCCTGATGCACCCAAGCTGGCTAGGGAAAGGTTGGCGAAAATGGGGCCAATGTCAGCCAATGAGAAAATCATGACTGCTACTCTGTTTCTTACGGTGGGACTTTGGGTTTTTGGAGGGCTTCTTAATGTAGATGCTGTAACTTCCGCCATTCTTGGATTAGCTGTACTTCTTATCACAGGGGTTGTAACATGGAAGGAGTGCTTAGCTGAGGGTGTTGCCTGGGATACTCTCACGTGGTTTGCTGCCCTCATTGCAATGGCCGGGTATTTGAACAAATACGGTCTTATCTCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGCCTTTCATGGCAACTATCTTTTGGTATTTTGGTTCTCCTATACTTCTACTCCCATTACTTCTTTGCCAGTGGAGCTGCTCATATTGGCGCCATGTTTACTGCATTTTTGTCTGTTGCTACTGCTCTGGGGACTCCACCATTCTTCGGAGCCATGGTGCTGTCTTTCCTCTCCAACCTTATGGGCGGCCTTACTCATTATGGGATTGGGTCAGCTCCAGTGTTTTTCGGTGCCAACTATGTCCCGCTTGCCAAATGGTGGGGTTACGGCTTTGTTATTAGTATTGTTAACATTATAATCTGGCTTGGACTTGGGTCTATTTGGTGGAAAGCCATTGGCTTGTGGTAA 1680 0.4726 MASIPLTTATTATTLPSLRLRSSPPLRRLQSNNAFKPLKSIRHSSISSFSPLPLSNLISKRQTLTVKASSASITPAPSPAPAPVPAVPWQGAAIKPLLASIATGVIIWFLPTPEGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFVAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENKLGSWLMLTCFQTSCISSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLVSLVLVPLILYIIYPPTMKSSPDAPKLARERLAKMGPMSANEKIMTATLFLTVGLWVFGGLLNVDAVTSAILGLAVLLITGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFVISIVNIIIWLGLGSIWWKAIGLW* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4854 559 Pfam Sodium:sulfate symporter transmembrane region 96 559 IPR001898 GO:0016020|GO:0022857|GO:0055085
Psa7g4854 559 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 111 553 IPR001898 GO:0016020|GO:0022857|GO:0055085
Psa7g4854 559 CDD ArsB_NhaD_permease 131 553 - -
Psa7g4854 559 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 36 559 IPR030676 -
Psa7g4854 559 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 36 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4854 Psa-Chr7 422372771 422376779 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4854 18 558 Antiporters AT5G12860 80.847 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4854 - - gmx:100796365 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4854 7 422372771 422376779 Psa7g4854 7 422372771 422376779 ECH