Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4853 ATGAAATGGGCAATGAGATTGAGAGTGGCTTTGTATTTAGCACAAGCCTTGGAATACTGCAATAGCAGAGGAAGGGCACTGTACCATGATCTTAATGCTTATAGAATTTTGTTTGATCAGGAAGGAAACCCTAAACTCTCTTGTTTTGGACTCATGAAAAACAGTAGAGATGGCAGAAGCTATAGTACAAATTTAGCCTTCACTCCTCCAGAGTACTTGAGAACAGGAAGAATCACCCCTGAGAGTGTAATCTACAGTTTTGGCACCTTATTGCTTGATCTTTTAAGTGGAAAGCATATTCCACCAAGTCATGCACTAGACCTTATACGAGGCAAAAATTTCCAAATGCTGATGGACTCGGGTTTGGAAGGTCATTTTTCAAATGACGATGGAACTGAGATAGTGAGATTATCTTCGCGTTGTTTACAATATGAACCTCGTGAGAGACCAAATGCCAAGTCGCTCGTGACTGCTCTGACCCCCCTTCAGAAAGAAACTTCTGTTCTGTCATATGTTTTAATGGGCCTACCGGATAGGAGTCTATCATCAAAAGAAACTGTTACATTAACGTCTTTTGGCGAAGCTTGTTCAAGAAGAGATCTGACTGCAATACATGAAATTTTGGAAAAGGTCGGGTACAAGGACGATGAACATGTTGCGAATGAGCTTTCCTTTCAAATGTGGACAAATCAAATACAAGATACACTAAATTTCAAGAAACGCGGTGATTCTGCTTTTATCGCGAGAGACTTCTCGACAGCCATTGACTACTATACGCAATTCATCGACAGGGGAACCATGGTATCACCGACTGTGTACGCAAGGCGCTGCCTATGCTACATGATGAACGACATGGCACAAGAAGCACTTGGAGACGCGATGCAAGCTCAATCGATATCTCCGACTTGGCCTACTGCATTCTATCTTCAAGCAGTTGCACTCTCTAGCCTTGGCATGGACAATGATGCACAAGAGAGTCTCAAAGATGGGACAACACTGGAAACTAGAAACCACAGAAATTGA 1023 0.4242 MKWAMRLRVALYLAQALEYCNSRGRALYHDLNAYRILFDQEGNPKLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFQMLMDSGLEGHFSNDDGTEIVRLSSRCLQYEPRERPNAKSLVTALTPLQKETSVLSYVLMGLPDRSLSSKETVTLTSFGEACSRRDLTAIHEILEKVGYKDDEHVANELSFQMWTNQIQDTLNFKKRGDSAFIARDFSTAIDYYTQFIDRGTMVSPTVYARRCLCYMMNDMAQEALGDAMQAQSISPTWPTAFYLQAVALSSLGMDNDAQESLKDGTTLETRNHRN* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4853 340 Pfam Protein kinase domain 10 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4853 340 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 340 IPR045845 GO:0004672|GO:0009742
Psa7g4853 340 SUPERFAMILY TPR-like 233 334 IPR011990 GO:0005515
Psa7g4853 340 Gene3D Tetratricopeptide repeat domain 233 340 IPR011990 GO:0005515
Psa7g4853 340 SUPERFAMILY Protein kinase-like (PK-like) 2 166 IPR011009 -
Psa7g4853 340 Gene3D Transferase(Phosphotransferase) domain 1 1 177 - -
Psa7g4853 340 ProSiteProfiles Protein kinase domain profile. 1 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4853 340 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4853 Psa-Chr7 422234630 422237223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4853 1 159 Glycoside Hydrolase AT3G07070 34.783 2.23e-21 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Psa7g4853 Pkinase 4.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4853 - - gmx:732542 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4853 7 422234630 422237223 Psa7g4853 7 422234630 422237223 ECH