Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4839 ATGGGGGAAGAGATACGAACAGACGAAGAGCGTGTAACGGAGTGGGAAAAGGGTCTACCCAACCTTCACGATCTCACTCCTCTTTCCATGGCGTTGATCCCACCGGAGCTAGCTTCCGCCTTCAGCATCTCCCCGGAGCCTCACCGTACACTCATCGACGTCAACCGCGCCTCCCGCAACACTCTCTCTATCCTCCGAGGCGGCGGGACAAATCACCAAACGTTCTCATCCAACAACGAAGAAATTATAGAAGAAGAAGATGAAGAAATGGAAGAGGAAACCGATCGGGACGGTTCCGGTTCGGATTCGCGAAAGCTTCGGAAGATCGATTCCGCTACGGAGGAAGCGGATTCGGCGGTTAGAACAGAAACGACGCTGAAACGGCCGCGTTTAGTGTGGACCCCGCAGCTTCACAAGAGATTCGTCGACGTTGTGGCTCATCTCGGGATAAAAAACGCGGTTCCGAAAACGATTATGCAGTTGATGAATGTGGAAGGGTTAACACGTGAGAATGTTGCTAGTCATCTTCAGAAGTATAGGCTTTATTTGAAGAGGATGCAAGGTCTTTCAAATGATGCTCCTTCTTCTTCTGATCATCTTTTTGCTTCTACTCCTGTTCCTCAGAGTTTACATGAATCTGCTTCTGCTGTGAATTCTCATTCGCAATCGAATGGACATGGGAATTCGCATTCGCATCATTCTGTTACGATTTCTATGCCTTATCCACCGCCTCCTCCGCCGATGATGTCTATGCCTTTACTTGGTATGCCGCCGCATCCTCATGGGCATATGGGAATGGCTTTACATCCTCCGTCTGGTTCTTCTTCTTACCGGTCGCATCCCTTTAACATGATGCATCATAGGGATTGGCCTCCTCATCCTCACTCTCATTCTCACCCTCACATGTCTCCTAATGATAGTAATAAATAG 930 0.4892 MGEEIRTDEERVTEWEKGLPNLHDLTPLSMALIPPELASAFSISPEPHRTLIDVNRASRNTLSILRGGGTNHQTFSSNNEEIIEEEDEEMEEETDRDGSGSDSRKLRKIDSATEEADSAVRTETTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNDAPSSSDHLFASTPVPQSLHESASAVNSHSQSNGHGNSHSHHSVTISMPYPPPPPPMMSMPLLGMPPHPHGHMGMALHPPSGSSSYRSHPFNMMHHRDWPPHPHSHSHPHMSPNDSNK* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4839 309 MobiDBLite consensus disorder prediction 190 236 - -
Psa7g4839 309 MobiDBLite consensus disorder prediction 97 121 - -
Psa7g4839 309 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 296 IPR044841 GO:0003700|GO:0006355
Psa7g4839 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 184 IPR017930 -
Psa7g4839 309 MobiDBLite consensus disorder prediction 190 243 - -
Psa7g4839 309 MobiDBLite consensus disorder prediction 288 302 - -
Psa7g4839 309 MobiDBLite consensus disorder prediction 84 121 - -
Psa7g4839 309 Pfam Myb-like DNA-binding domain 132 180 IPR001005 -
Psa7g4839 309 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 7 296 - -
Psa7g4839 309 Gene3D - 124 187 - -
Psa7g4839 309 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 129 181 IPR006447 GO:0003677
Psa7g4839 309 MobiDBLite consensus disorder prediction 288 309 - -
Psa7g4839 309 SUPERFAMILY Homeodomain-like 125 185 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4839 Psa-Chr7 420062270 420065670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4839 1 212 G2-like Transcription Factor Family AT3G46640 60.669 1.00e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa7g4839 Myb_DNA-binding 1.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4839 - - aprc:113858844 346.28