Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4833 ATGAAGCAAATGGAACAAGAAAAAGCACATATCTTGGAAGCAAGAGCGGGAGAGGAAATTGAGATGCCAATTGTGTCTGACTCAGACAGACTTGATCTTCTGACAACGACGGCGTCGGTCTGTCGTTTTTCGAGAAAGGAAAACAGTGATGGTGCGTCGAATGAATCGGTGAAGAAACTTTCTTTACTGATAGTTTTCTATGCTGTTGTTATGGTTGTTGAACTTATTGGAGGAATGAAAGCTCACAGCTTGTCTGTTATCAGTGATGCTGCACATTTGCTTTCTGATATTGCTGGATTTGCGATATCTCTGTTTGCAGTGTGGGCTTCGGGTTGGGAGGCAACGCCTCGTCAATCTTTCGGATACAATCGTCTTGAGGTTTTGGGGGCTCTTTTATCTGTTCAGTTAATTTGGTTCATATCTGGTTTTTTAATATATGAAGCAGTTGGTAGAATTCTTTATAGAAATGATAGTGTGAATGGAAAACTCATGTTTGCAATTGCAACATTTGGTTTTGTTCTTAACTGTATCATGGTTTTATGGCTTGGTCATGATCATAGTCATCATCATGGATTTGGAGATTCACATGGTCACGATCATGATCATGATCATAGTCATAGTCATAGTCATCATCAATGTCGTGGAGACGCGGATCATGATCATGGGACAGAGGAACTGTCTAAAATAACTGATGAGGAGAATCTTACTATGATTTCAAATGGTAAGAGAAAAATGAATGTTTTGAACATTAATCTCCAAGGGGCTTATTTGCATGTGATGACTGATATGATTCAATCTATGGGAGTGATGATTGCCGGAGGAGTAATATGGGCTAAACCCGAATGGTTTATAGTAGATCTTTTATGTACTCTCGTTTTCTCGGTTTTATCCTTAAGTACTACTCTAACAATGCTTAAGAATATTTTTGGCATTCTGATGGAGAGGACGCCGAGTGAGATTAACATCATTCATCTCGAAAATGGTCTTAGAAGTATCAAGGGAGTGCAGGAGGTTCACGATTTGCACGTTTGGGCTATAACGGTTGGTAAACTTTTTCTATCGTGTCATGTAGTAGCCGAACCGGGCATTAGTTCTATTGATTTACTTGAAACGATGAAACAGTATTGCGAAAACACTTATCAAATACAACATGTAACCATACAAATTGAGTAA 1173 0.3887 MKQMEQEKAHILEARAGEEIEMPIVSDSDRLDLLTTTASVCRFSRKENSDGASNESVKKLSLLIVFYAVVMVVELIGGMKAHSLSVISDAAHLLSDIAGFAISLFAVWASGWEATPRQSFGYNRLEVLGALLSVQLIWFISGFLIYEAVGRILYRNDSVNGKLMFAIATFGFVLNCIMVLWLGHDHSHHHGFGDSHGHDHDHDHSHSHSHHQCRGDADHDHGTEELSKITDEENLTMISNGKRKMNVLNINLQGAYLHVMTDMIQSMGVMIAGGVIWAKPEWFIVDLLCTLVFSVLSLSTTLTMLKNIFGILMERTPSEINIIHLENGLRSIKGVQEVHDLHVWAITVGKLFLSCHVVAEPGISSIDLLETMKQYCENTYQIQHVTIQIE* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4833 390 Gene3D Cation efflux protein transmembrane domain 57 312 IPR027469 -
Psa7g4833 390 Coils Coil 1 21 - -
Psa7g4833 390 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 320 390 IPR036837 -
Psa7g4833 390 PANTHER METAL TOLERANCE PROTEIN B 4 390 - -
Psa7g4833 390 Pfam Cation efflux family 62 313 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Psa7g4833 390 SUPERFAMILY Cation efflux protein transmembrane domain-like 57 314 IPR027469 -
Psa7g4833 390 TIGRFAM CDF: cation diffusion facilitator family transporter 58 390 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Psa7g4833 390 MobiDBLite consensus disorder prediction 196 224 - -
Psa7g4833 390 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 4 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4833 Psa-Chr7 419789783 419791745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4833 4 390 Inorganic Solute Cotransporters AT2G29410 48.974 2.82e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4833 K14689 - gmx:100789520 509.99