Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4819 ATGCTTTTCTGCTTCATATATGTAGGAATATTAATCGATATTGGACTTACTCATACTTATTGGGCAGTTATTTTGGTATTCATGATATTAAACTCCCCTCAGATGTCACATTATTTTTTGCTCTGGATAGTACTAGCTGTCTTTGTGATGGCTACAAGTCTGAGAATGTATGCAACATGTCAACAGCTTCAAGCGCAAGCCAGGGCTCATGCTGCAGCAGCCTCTGGGTTGCTTGGCCATGCTGAATTACATTTTCAAATGCCACCATCTATTGCAATTGCAACTAGAGGAAGATTGCAGGGACTTAGACTTCAGCTTGCACTTCTTGACCGAGAATTTGATGAGCTAGATTATGACACCTTGAGAGCTTTAGACTCTGATACTGCTTCTAGTACTCCTTCAATGACTGAGGAAGAGATAAATGCCTTGCCTATTCACAAGTATAAAGTATCAGGCCCAACAAAACATGGCTCCACCGGTTTAACATCTTTTTCAGAGGCAGCTGAGAGTAAAGAAGACTCTAAAGGAGCAGAGCGAAGTGTCAAAGGTTCAGAAGATGAGCTGATATGTACTATATGCTTGGACCAAATTACGAGGGGGGAACTTGTGCGTAGCTTGCCGTGCTTGCATCAGTTTCATGCCAATTGCATCGTTCCATGGCTTCGGCAACAAGGAACATGTCCTGTGTGCAAATTTAGGATGGGCTCAGAAAGGCAGGGAAACACCGATAGCGAGTCAGGTGATTCAGATATTTTGTAA 759 0.4269 MLFCFIYVGILIDIGLTHTYWAVILVFMILNSPQMSHYFLLWIVLAVFVMATSLRMYATCQQLQAQARAHAAAASGLLGHAELHFQMPPSIAIATRGRLQGLRLQLALLDREFDELDYDTLRALDSDTASSTPSMTEEEINALPIHKYKVSGPTKHGSTGLTSFSEAAESKEDSKGAERSVKGSEDELICTICLDQITRGELVRSLPCLHQFHANCIVPWLRQQGTCPVCKFRMGSERQGNTDSESGDSDIL* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4819 252 PANTHER TARGET OF ERK KINASE MPK-1 22 251 - -
Psa7g4819 252 CDD RING-H2_PA-TM-RING 190 231 - -
Psa7g4819 252 SUPERFAMILY RING/U-box 185 235 - -
Psa7g4819 252 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 22 251 - -
Psa7g4819 252 Pfam Ring finger domain 190 231 IPR001841 -
Psa7g4819 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 174 247 IPR013083 -
Psa7g4819 252 MobiDBLite consensus disorder prediction 156 180 - -
Psa7g4819 252 SMART ring_2 190 230 IPR001841 -
Psa7g4819 252 ProSiteProfiles Zinc finger RING-type profile. 190 231 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4819 Psa-Chr7 417983761 417987745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4819 23 248 C3H Transcription Factor Family AT3G55530 67.249 1.38e-95 280