Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4816 ATGGAGTCTGATCAATATGAACATGCTGGTGGTGGTGGTGGTGATGATCAAGGTGATGCAAAACAAGTTACCATCAACCTTAGGTCCTATGAGTGCAATTTCTGCAAGAGAGGTTTCTCTAATGCACAAGCACTAGGTGGGCACATGAATATCCATAGAAAAGACAAAGCGAAACTCAAACAACAATCCTCAAATATTGAAGCAAATCCTAGTGATATTCAAGAGGTGAATAAGTTATTACCAAACTTGAAGTCTAATATTGCACTGTCTCAATCTCAACAACAAGATCAACAACATCAACAACATCATGCTCCTTGTAGAGATGTTGTTGATGAAACTGTTGTAACTCAAGTGAGACAACAGCTTCCACTTTTTTCTGAATCACCAACAAAAAGTGAAATGCAAAAGCCACAACCACAGCCATCACAAGGTGAAACTCAAGGAGAAAAAACTACTACTAGTTCTACTACAGAAGAGAGTTTGTTATTGTCCGGTCAAGATTCTTCAATGGAGTTAGACCTAGAGCTGAGATTAGGGCCGGAGCCACATGATTCATCAGCACCAACGGGTACCAGAAAATTCTTTTGA 588 0.3963 MESDQYEHAGGGGGDDQGDAKQVTINLRSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSSNIEANPSDIQEVNKLLPNLKSNIALSQSQQQDQQHQQHHAPCRDVVDETVVTQVRQQLPLFSESPTKSEMQKPQPQPSQGETQGEKTTTSSTTEESLLLSGQDSSMELDLELRLGPEPHDSSAPTGTRKFF* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4816 195 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 15 187 - -
Psa7g4816 195 Coils Coil 49 69 - -
Psa7g4816 195 MobiDBLite consensus disorder prediction 1 20 - -
Psa7g4816 195 Gene3D Classic Zinc Finger 19 109 - -
Psa7g4816 195 MobiDBLite consensus disorder prediction 123 195 - -
Psa7g4816 195 ProSitePatterns Zinc finger C2H2 type domain signature. 32 52 IPR013087 -
Psa7g4816 195 ProSiteProfiles Zinc finger C2H2 type domain profile. 30 57 IPR013087 -
Psa7g4816 195 MobiDBLite consensus disorder prediction 123 167 - -
Psa7g4816 195 PANTHER OS07G0101800 PROTEIN 15 187 - -
Psa7g4816 195 Pfam C2H2-type zinc finger 30 54 - -
Psa7g4816 195 SUPERFAMILY beta-beta-alpha zinc fingers 28 57 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4816 Psa-Chr7 417540219 417541224 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4816 28 179 C2H2 Transcription Factor Family AT3G09290 36.875 3.92e-17 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa7g4816 zf-C2H2_6 1.7e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4816 - - gmx:100527724 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4816 7 417540219 417541224 Psa7g4816 7 417540219 417541224 ECH