Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4775 ATGGAAGATCAATTTTCTTCAAAGGAGAAAGGAATTAGCTTCTGGACACCATTGGATAATGGAATGAAAAGTTCAACAGCTTCAGATGATATGTTTAACAACATCTCTGAGCTGATGAACTTCGACAGCTACGCCGGTTGGTGCAACGGTTCGTCGTCGATAACGGATCAAACTCTAACTAATGATCTTTCATCATTTGCATATTCATCACCTCATGATGGATTGAATTTAGTTGAACATATTGATGGTTCATTTTTCATGACAGAAAGTGGTGGAAGTTACAATGTTATGGATTGTGAAAAAGTACTATTACAACAAATGGAAACTCAACTTGAGTTCTTAGATAATGAAAATGAAACAAATAGTAATAATAATAATTTAGGTTCACAACAAGAACAAAATGGTTCATTTGATATGTGTAATTACATGATATCGAAATCGCCGAGTTGGTCACTTGATGAGAGAATGATGAATGCTTTATCATTCTTTAAGGAATCAGCTGGTGGAGGAATATTAGCCCAAGTTTGGGTACCGATAAAATATGGCGACGAATTCGTCTTAACTACTAGTGATCAACCATATTTGTTAGACCAAAAGCTTGCAGGTTATCGTGAAGTGTCGAGGTCGTTTACGTTTTCTGCGGAAACGAAAACGGGATCTTGTTGTCCTGGACTTCCCGAACGTGTCTATAACTCGCATATTCCTGAGTGGACCTCTAATGTTGGTTACTATCATAAATCTGAGTATTTAAGATTAGATCATGCAATTAGTCACGAGGTTCGCGGTTCAATTGCGCTTCCTGTATCTGATATGCACTCTGAAGTTTCATGTAGTGCTGTGCTAGAACTTGTTACTACAAAGGAAAAACCGAATTTCGACAAAGAGTTAGAATTTGTTTCGCATGCGCTCCAGCGTGTGAATTTAAGGACTATTACGCCTCCGCGACTACTTCCACAGTGTGTGTCAAATAACAAAAGAGCTGCATTAACCGAGATAACGGATATATTAAGAGCTGTTTGTCATGCGCATAGATTACCACTAGCACTGACATGGATTCCGTGTTATTATACTGAGGGAAAAGGCGAAGAATCTGAGAAAATACGAATTAAAGAAGGCCATACGAAAAGTTCTGATGAAAAATGTGTACTATGCATTGAAGAATCGGCTTGTTATATAAATGATAAAACGGCTGGAGGATTTGTTCATGCGTGTTCTGAACATCATCTTGAGGAAGGACAAGGTATATCTGGAAAAGCTCTTCAATCAAATCATCCGTTTTTCTATACCGACGTGAAGGCTTATGATATTAGTGAATATCCGCTTGTTCATCACGCGCGAAAATATAACTTAAACGCTGCGGTTGCAACTAGGCTAAGAAGTACTTATACAAACGACGAGGATTACGTCTTAGAATTCTTTCTTCCTATCAATATGACAGGGAGTTCAGAACAACAGCTTTTATTAGACAATTTGTCAGATACTATGAGGAGAATTTGCAAGAGTTTGAGGACAGTTTCAGAAGCCGAACTAAGAGGGTTAGAAGGTTCTCAAGATCGGTTTTATAAGGAAAATGTCTCGGGTTTTTTTCCAATGTCTAAGGGAAGCTCTCAGATAGCATTTACAAGTGATGACCATGATTTATTTCAGATGTCATTGAATGAAATTAACCTAAAGAATAATGGAAATCAAGCTACTCATAGTCAGACATTCAGTGGATCAAGAAAGCTGGCTGAGAAAAAGAGAAGTGCGGTAGAGAAGAATGTTAGCCTGAGTGTTCTGCAGCAATACTTTTCTGGTAGCCTGAAGGATGCTGCAAAGAGAATCGGGGTTTGTCCAACAACTCTGAAGAGGATATGCAGGCAACATGGAATCTCAAGATGGCCATCGCGTAAGATAAATAAAGTGAACCGTTCGTTGAAGAAAATACAAACTGTTCTTGATTCTGTCCAAGGAGTGGAAGGAGTGCTGAAATTTGATCCTCACACTGGTGGGTTTGTTGCAGGAGGATCAATCATCCAACAGATTGGTACACATAATAAAGCTCTCGTGTTACCTGAGAAAATCTCGGTAGAGAATTCAGCCGTTAAGTTGGAGGATGATGGTGTTCTTATTTCAAATTTATGCGAGGAAGAATTGAAGAAAGACGATGTTTCTTCTGTTGACTGTATTCCAGATTCAACATCATGGCTTTGTCCTAAACAAAACTCTATAGATTCTGTTCTTGAGATAGAGGAAGATCGATGCGATTTGAACAATAGTAGTTTGCATGATATTAACTCGAATAGTTCATTCACATTGATTGAACTTGGTTTGGATGAAGGAAAAGGAGTTGAAGAACATAATAACCCTACTTCTTCAAGCATGACAGATTCATCCAATGCCTCTGGACCAATGGTGCATGGAAGTTCATCAGGCTCTCAAAGCATTGAGAACCAAAAGCACTCAAAAGTCAATTCAATTTGTGTTGACAGCGAGTCGAAGTTCGCTGTCAAAGCTAACTTTAGAGGCGATACTATTCGTTTCAAGTTTGATCCGTGTGTAGGTTGTTTTCAACTATACGAAGAAGTTGCAACAAGGTTTAAGTTACAAAATGGATCGTTTCAACTCAAGTATCTAGATGATGAAGAGGAATGGGTGATGTTGGTGAATGACTCAGATTTGAAGGAATGTGTGGAAGTTTTGAGTGATATTGGCACACAATGCGTGAGGTTACTCGTTCGCGATATTCATAGCAGTAATAACAGTTGA 2748 0.3854 MEDQFSSKEKGISFWTPLDNGMKSSTASDDMFNNISELMNFDSYAGWCNGSSSITDQTLTNDLSSFAYSSPHDGLNLVEHIDGSFFMTESGGSYNVMDCEKVLLQQMETQLEFLDNENETNSNNNNLGSQQEQNGSFDMCNYMISKSPSWSLDERMMNALSFFKESAGGGILAQVWVPIKYGDEFVLTTSDQPYLLDQKLAGYREVSRSFTFSAETKTGSCCPGLPERVYNSHIPEWTSNVGYYHKSEYLRLDHAISHEVRGSIALPVSDMHSEVSCSAVLELVTTKEKPNFDKELEFVSHALQRVNLRTITPPRLLPQCVSNNKRAALTEITDILRAVCHAHRLPLALTWIPCYYTEGKGEESEKIRIKEGHTKSSDEKCVLCIEESACYINDKTAGGFVHACSEHHLEEGQGISGKALQSNHPFFYTDVKAYDISEYPLVHHARKYNLNAAVATRLRSTYTNDEDYVLEFFLPINMTGSSEQQLLLDNLSDTMRRICKSLRTVSEAELRGLEGSQDRFYKENVSGFFPMSKGSSQIAFTSDDHDLFQMSLNEINLKNNGNQATHSQTFSGSRKLAEKKRSAVEKNVSLSVLQQYFSGSLKDAAKRIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGVLKFDPHTGGFVAGGSIIQQIGTHNKALVLPEKISVENSAVKLEDDGVLISNLCEEELKKDDVSSVDCIPDSTSWLCPKQNSIDSVLEIEEDRCDLNNSSLHDINSNSSFTLIELGLDEGKGVEEHNNPTSSSMTDSSNASGPMVHGSSSGSQSIENQKHSKVNSICVDSESKFAVKANFRGDTIRFKFDPCVGCFQLYEEVATRFKLQNGSFQLKYLDDEEEWVMLVNDSDLKECVEVLSDIGTQCVRLLVRDIHSSNNS* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4775 915 MobiDBLite consensus disorder prediction 780 811 - -
Psa7g4775 915 Coils Coil 97 124 - -
Psa7g4775 915 MobiDBLite consensus disorder prediction 778 811 - -
Psa7g4775 915 Pfam PB1 domain 829 908 IPR000270 GO:0005515
Psa7g4775 915 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 15 910 - -
Psa7g4775 915 SMART PB1_new 827 909 IPR000270 GO:0005515
Psa7g4775 915 ProSiteProfiles RWP-RK domain profile. 574 655 IPR003035 -
Psa7g4775 915 SUPERFAMILY CAD & PB1 domains 823 911 - -
Psa7g4775 915 ProSiteProfiles PB1 domain profile. 827 909 IPR000270 GO:0005515
Psa7g4775 915 Pfam RWP-RK domain 587 635 IPR003035 -
Psa7g4775 915 PANTHER PROTEIN NLP8 15 910 IPR045012 GO:0003700
Psa7g4775 915 Gene3D - 823 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4775 Psa-Chr7 415251965 415255076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4775 1 911 NLP Transcription Factor Family AT2G43500 47.934 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Psa7g4775 PB1 9.7e-17 CL0072