Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4757 ATGCCTTGTCCTTCATTCCACAAGCTTGTTCTACCCTCCACTCTCCAAGCTAAGCAACTGAGGCTTCCAGATGATTTTGTGAGGAAATACGGGGGCGATATTTCTCCGATTGTTACTCTCACGGTTCCTGACGGAAGTGTGTGGCGTGTAGGATTGAAAAAGGAAGACAAGAAATTTTGGTTCCTCAATGGCTGGCGTGAGTTTGTTCAAAACTATTCCGTCGGGGTTGGATACTTGTTGCTATTCAGATACGAAGGAAAGTCATCTTTCAATGTTAATATTTTTTGTTTGGCTACTTCTGAGATTAACTATCAATCACCTGCACAAAGCAGGAACGAAGGGTCTCTTGTTGCAAAACGTCTTAAAATTTTCGAAGAAATGGAAGATGAAGATTCAATTGAAATCCTCAATTTGTCGCCGAGGAACCTTACTCCTAGCCCATTTCAAAACAAAAATGTTTCTGGAGCAGCTGATAAGTTCACGCCTGGCAAGTCTCGTTCGCCTCCAGCGCTGCAGAATCTGTTTAATGGATCTAAACTTAATAGCATAAACTGGGGAGAAAGTGGGAATACTCCTTCTTCTAGAAGTTCCAATTCAATAGACAGCCACTTGACCCGAGATATAGGTCTCCAGTTTAACGTAGTCGAGTTTAAAAAGTCGACTGAAGAGGTGAAGTTGCGCGCGGCCACTGATGAAAAGGTTAAAAAAACTGCGACAAAGAAGCGGAAGTCAGATGTTCATGAACCTCCTTGTGAACACGAAGATGAGGTAGAAATGCGCAATAGGTTTTATGAAAGTGCATCTGCAAGGAAAAGAACTGCGACAGCTGAAGAAAGAGAAAAGGCTATCAATGCAGCAAAAGCATTTGAACCATCTAATCCTTTCTGTCGAGTCGTCCTGCGACCCTCCTATTTATATAGGGGATGCATAATGGTGATCTGTTGA 945 0.4254 MPCPSFHKLVLPSTLQAKQLRLPDDFVRKYGGDISPIVTLTVPDGSVWRVGLKKEDKKFWFLNGWREFVQNYSVGVGYLLLFRYEGKSSFNVNIFCLATSEINYQSPAQSRNEGSLVAKRLKIFEEMEDEDSIEILNLSPRNLTPSPFQNKNVSGAADKFTPGKSRSPPALQNLFNGSKLNSINWGESGNTPSSRSSNSIDSHLTRDIGLQFNVVEFKKSTEEVKLRAATDEKVKKTATKKRKSDVHEPPCEHEDEVEMRNRFYESASARKRTATAEEREKAINAAKAFEPSNPFCRVVLRPSYLYRGCIMVIC* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4757 314 Pfam B3 DNA binding domain 9 94 IPR003340 GO:0003677
Psa7g4757 314 SMART B3_2 6 98 IPR003340 GO:0003677
Psa7g4757 314 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Psa7g4757 314 PANTHER B3 DOMAIN-CONTAINING 1 312 - -
Psa7g4757 314 Gene3D - 2 97 IPR015300 -
Psa7g4757 314 PANTHER B3 DOMAIN TRANSCRIPTION FACTOR VRN1-LIKE PROTEIN 1 312 - -
Psa7g4757 314 CDD B3_DNA 4 96 IPR003340 GO:0003677
Psa7g4757 314 Gene3D - 273 314 IPR015300 -
Psa7g4757 314 SUPERFAMILY DNA-binding pseudobarrel domain 3 96 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4757 Psa-Chr7 414505234 414507137 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4757 1 313 B3 DNA Binding Superfamily AT3G18990 44.762 6.27e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Psa7g4757 B3 1.9e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4757 - - gmx:100813285 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4757 7 414505234 414507137 Psa7g4757 7 414505234 414507137 ECH