Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4728 ATGAAGGTTAAGGTTTTCATATTTCTCTTATTTTCTCTTATGATGATTACATTGTGTTATGGTAAAACTGACCCAAATGATCTCAAAGTTCTGAATGATTTCAGAAAAGGGTTGAAGAATCCAGAGCTTCTGAAATGGCCTGAAAATGGAGATGATCCATGTGGTCCACCTCAATGGAGTTATGTGTTTTGTAACAATGGTAGAGTTACTCAGATTCAAGCTAAGAATCTTGGTCTTAAAGGCTCTTTGCCTTCAAATTTCAACCATCTTTCTGAGCTTCAGAATTTAGGTCTTCAAAGGAACAATTTATCTGGAATGTTACCTAGTTTGAGTGGATTATCCAAATTACAATATGCTTATTTGGATTACAATGAATTCGACGGAATCCCGATAGATTTCTTCGAAGGACTCGATAGTCTTCAGGTTTTGTCTTTGGAAGTAAACCCTTTGAATGCTACTAATGGTTGGTTGTTTCCTTTGGGATTGAAAAATTCAGTTCAGTTGGTGAATCTTTCTCTGGTGAGTTGTAATGTGGTTGGTCCTTTACCTGATTTTCTAGGCACATTGTCGTCTTTATCGAATTTGAGGCTTTCGGGAAACAGAATTTCGGGGGAAATTCCGGTTAGTTTCGGTCAATCGTCATTACAGGTACTATGGTTGAATAATCAACAAGGTGGTGGAATGACAGGTTCTATTGATGTTATTGCTTCTATGACATTTTTGACACAGGTTTGGTTACATGGAAACCAGTTCACCGGAACGATTCCGTCGAATATCGGGAATTTGACTTCTCTTCGGGAGCTTAACGTCAATGGTAATCAACTTGTTGGTATGATTCCCGATTCATTAGCAAATATGGAACTTCAAAAACTTGAGTTAGATAATAACATGTTCGTCGGTCCAATACCGAAGTTTAAGGCTACAACAGTAACTTATGCTTCAAATTCCTTTTGTCAAAGTAAACCCGGTCTTGAATGTGATCCTAATGTTAATATATTGTTGAATTTTCTCTCCGATTTGAATTATCCGGCATTTGTTGTTCCTAAATGGGTTGGTAATGATCCTTGCGGAGGATCGTGGTTTGGATTGAGCTGCATTCGTAGCTCGGTATCGATAATCAATCTGCCTAGAAAGAATCTTACCGGTACGTTGAGTCCTTCGCTTGCTATGTTAGATTCATTGCTTGAAATTAAGCTTTCGGGAAACAATATAACCGGTAAGGTTCCGAGTAATTTTACTGAATTGAAATCTTTGAGGCTGTTGGATTTAAGTGATAACAATTTTGAACCTCCATTGCCAAACTTTCGCAAAGACGTGAAGGTTATCGTTGACGGTAACCCTCTTTTTGATAATCAACCTCGACCGAGTCCTGCTCCTATTTTAACTCCACCACCTTTAATCGAACCACCTTCACCACCACGTAACGTGCCGCAGCCACAACCAAAGCCGCCGTCCCTGTCCTCCGATAGTCCAGAATCTAATCAGTCTAGGAATGTCGAATCAAATCCTCAACCTAGTAATTCGAATAGACTGAAAACAGTTGCAGTAGTGGTTGGAGGTGTAGTTATTGGATTTGTAGCTCTTTCGGTTATTGTTTTCTTTATATGTTGTTGTTCGAAGAAGAATAAGAAGAAAGTCTCGATTGACGCTTCTAGCTCTGCTGTGGCTCACGCTCAAGATCCGTCCGATCCTAAAGTGATGGTTAAATTTGCGGTGTCGGATAGCACAACGGGAAGCTTATCGACAAATACAGGAGTAAGTTCTCTGACTAACAATAGCGGCGAAACCGAAAGCTATCATGTAATTGAGTCTGGTGGTAACCTTGTCATATCGGTTCAAGTTCTACGCAAGGTCACCAACAATTTTGCTTCGGAAAATGAGCTAGGCCGTGGCGGGTTTGGAACTGTTTACAAAGGCGAACTAGAAGACGGGACGAAAATAGCAGTGAAAAGAATGGAATGTGGAACCATTAGCAGTAAAGGACTCGACGAGTTTCAAGCAGAAATAGCCGTTCTTTCCAAAGTTCGGCACCGACATTTGGTATCCCTTCTAGGCTATTCCATTGAAGGAAATGAGAGGCTTTTGGTTTATGAATACATGCCTCTTGGGGCTCTAAGCAGACATCTTTTCCATTGGAAAAGCTTGAATTTGGACCCTTTGACTTGGTCACAGAGGCTTGTTATAGCACTAGATGTTGCTCGAGCGGTGGAATACCTTCACAGTCTTGCTCGACAAATCTTCATCCATCGAGACCTTAAGTCTTCGAATATTCTACTTGGTGATGATATTCGAGCAAAAGTCGCTGATTTTGGTTTGGTGAAACTTGCGCCCGATGGTGAAAAGTCTATGGCAACAAAACTTGCTGGAACATTTGGATACCTCGCCCCTGAATATGCAGTAATGGGAAAAATCACGACAAAGGTGGACGTATTCAGCTACGGCGTCGTGTTGATGGAACTTCTGACCGGATTAATAGCTCTTGACGAGAGCCGACCAGAGGAAAACCGGTACTTAGCCGAATGGTTTTGGCAAATCAAATCCAACGAAGAAAAGCTTAAGGCCGCAATCGATCCATCACTTGAAGTAAACGAAGAAACATTCGAGAGCATTTCAATTGTAGCCGAGCTTGCCGGACATTGCACCGCCCGGGAAGCTAGCCATAGGCCGGACATGGGGCACGCCGTCAAAGTACTATCGGAGTTAGTAGAAAAATGGCGACCGGTTGATGAGGAGTTTGATTACACCGGCGGAATCGACTTCTGTCAACCGCTACCGCAAATGTTGAAGATTTGGAAGGAAGCAGAAGGGAAAGATATAAGCTATGCAAGTAGTACTAATGATAGTAAAGGAAGTATACCAGCAAAGCCTTCTGGTTTTGCAGATTCCTTCACTTCTTCTGATGCTAGATGA 2910 0.4168 MKVKVFIFLLFSLMMITLCYGKTDPNDLKVLNDFRKGLKNPELLKWPENGDDPCGPPQWSYVFCNNGRVTQIQAKNLGLKGSLPSNFNHLSELQNLGLQRNNLSGMLPSLSGLSKLQYAYLDYNEFDGIPIDFFEGLDSLQVLSLEVNPLNATNGWLFPLGLKNSVQLVNLSLVSCNVVGPLPDFLGTLSSLSNLRLSGNRISGEIPVSFGQSSLQVLWLNNQQGGGMTGSIDVIASMTFLTQVWLHGNQFTGTIPSNIGNLTSLRELNVNGNQLVGMIPDSLANMELQKLELDNNMFVGPIPKFKATTVTYASNSFCQSKPGLECDPNVNILLNFLSDLNYPAFVVPKWVGNDPCGGSWFGLSCIRSSVSIINLPRKNLTGTLSPSLAMLDSLLEIKLSGNNITGKVPSNFTELKSLRLLDLSDNNFEPPLPNFRKDVKVIVDGNPLFDNQPRPSPAPILTPPPLIEPPSPPRNVPQPQPKPPSLSSDSPESNQSRNVESNPQPSNSNRLKTVAVVVGGVVIGFVALSVIVFFICCCSKKNKKKVSIDASSSAVAHAQDPSDPKVMVKFAVSDSTTGSLSTNTGVSSLTNNSGETESYHVIESGGNLVISVQVLRKVTNNFASENELGRGGFGTVYKGELEDGTKIAVKRMECGTISSKGLDEFQAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSRHLFHWKSLNLDPLTWSQRLVIALDVARAVEYLHSLARQIFIHRDLKSSNILLGDDIRAKVADFGLVKLAPDGEKSMATKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLIALDESRPEENRYLAEWFWQIKSNEEKLKAAIDPSLEVNEETFESISIVAELAGHCTAREASHRPDMGHAVKVLSELVEKWRPVDEEFDYTGGIDFCQPLPQMLKIWKEAEGKDISYASSTNDSKGSIPAKPSGFADSFTSSDAR* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4728 969 SUPERFAMILY Protein kinase-like (PK-like) 600 898 IPR011009 -
Psa7g4728 969 Gene3D Ribonuclease Inhibitor 328 452 IPR032675 -
Psa7g4728 969 SUPERFAMILY L domain-like 330 435 - -
Psa7g4728 969 Gene3D Transferase(Phosphotransferase) domain 1 700 914 - -
Psa7g4728 969 SMART serkin_6 622 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4728 969 PANTHER OSJNBA0070M12.3 PROTEIN 5 969 - -
Psa7g4728 969 PANTHER OSJNBA0070M12.3 PROTEIN 5 969 - -
Psa7g4728 969 SUPERFAMILY L domain-like 24 305 - -
Psa7g4728 969 CDD STKc_IRAK 628 901 - -
Psa7g4728 969 MobiDBLite consensus disorder prediction 471 486 - -
Psa7g4728 969 Gene3D Phosphorylase Kinase; domain 1 583 699 - -
Psa7g4728 969 Pfam Leucine rich repeat N-terminal domain 331 365 IPR013210 -
Psa7g4728 969 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Psa7g4728 969 MobiDBLite consensus disorder prediction 487 507 - -
Psa7g4728 969 ProSitePatterns Protein kinases ATP-binding region signature. 628 650 IPR017441 GO:0005524
Psa7g4728 969 MobiDBLite consensus disorder prediction 471 507 - -
Psa7g4728 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Psa7g4728 969 Pfam Protein kinase domain 624 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4728 969 Gene3D Ribonuclease Inhibitor 25 324 IPR032675 -
Psa7g4728 969 ProSiteProfiles Protein kinase domain profile. 622 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g4728 969 SMART LRR_typ_2 113 136 IPR003591 -
Psa7g4728 969 SMART LRR_typ_2 415 437 IPR003591 -
Psa7g4728 969 SMART LRR_typ_2 90 112 IPR003591 -
Psa7g4728 969 SMART LRR_typ_2 262 285 IPR003591 -
Psa7g4728 969 SMART LRR_typ_2 189 213 IPR003591 -
Psa7g4728 969 MobiDBLite consensus disorder prediction 942 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4728 Psa-Chr7 410294888 410298551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4728 56 901 Receptor kinase-like Gene Family AT1G55610 28.731 2.51e-78 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Psa7g4728 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4728 - - cam:101505581 1446.41