Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4706 ATGGGGTTTTTGTTGAAAGAAACTTTGAAGACTCTTTGTGCTAGGAATCAGTGGTCTTATGCTGTTTTCTGGAAGATCGGTTGCAATAATTCCAAGCTATTAATCTGGGAAGATTGCTACTATGAACCATTGCCATCTCGTCTCCTTCCACAAATTGCCGGAACGTCTAACTTGCCTTACCGAGATAGGGAAGGATGCTGGTTTTCTTCCGATTCTCAGCTACGGATTCAAGAGGACGACAGAGTTTGTTCGTTGATTAACAAAATGATGGTGAATAATTCTGTTAATGTTGCCGGTCAAGGGATACTTGGACGTGCGGCATTCACAGGAAATCATCAGTGGATTGTTCTGAACAATTTCATTAAAGATGCATATCCACCAGAAGTATTAACCGAGTTGCATTGCCAATTTTCAGCCGGAATGCAGACAGTGGCGGTTATTCCAGTGCTTCCTCATGGTGTTGTTCAACTTGGTTCTTTCTTGCCGATAATGGAGAATATCGGATTTGTGAATGATGTGAAGAACTTGATCTTTCAATTGGGACATGTTCCCGGTGCGCTTCTATCCGAAGACTATTCAACAAGACTTTCTAATGAAAGGTATTCTGGACCTGTGACTAATTGTATGCCATTTTCTTTCGATCCACAAGTCGTTACCTCAAACTGCACTCCCTCAGTAGCTAACAGTTCTAACCAACCGAGTATTTCACCGCATGGTCCAATGCATGTTGCTGCTCAACCCCCTTCTTTTCACAACGGTTCCGTATTGACACCTCAATCCCAAAACCTAAACCAGATATTAGAGAGCCTTTGCCAACCGAAGGCTCAACGAGAGAATACAACTGTGAAAGCTGAAGCTGAAGTGATATCTACAAATCTCGATTCTTCGTGTCTGCAGCAACGTTCCTTTTCATATAATGCAAGGTCTGCACTCGGTATGGAACAACAAATCTTCTCAGATATTGGGACACAAAGTCATGGTAACCGAAATATGAATCCATCGTCGAGTGCCTTAAATATGTCTCGACGGCAAACAGATGGAGGCCAAATTTATTATCAGAATTCTAACAACACTTCACTTCTTGGAGGAATCCCAATATGTAGTAGTGGGATGAGTAATAATAATCTTCTAAGGAAAAATATGATTAATTGCTCGGTTTCGAATCCTCCAAAGTTATCCACTACTGATTTTTCCGGAACACAAAAAGTAGGGTTCGGAATTCAAAATGATAATTCAACTACAGCTGCCAATCAGATGCATCGAAAAGGCTCTGATCAGAAGAATCTTCCCGTTGATTTAAAGTATGCTCAAAATGCTTCGGCTTCAACGGATGAAAGAATAGATGATTTGCTTCAGGCTTTGAAGATCCCGTCATCTCATCATCTTAAGGAGCATGTGCCAATGAACGATCACATCCCTGGTTTTCTTCATGATTTGGAACTTGAAGAAGCTTGTACGCAACTTTCATCGGGTGATGACGACTTGTTTGATGTATTGGGCGTAGATTTCAAAAGGAATCTGCTGAACGGAAACTGGAATACGTTGTTTGCCGATGAATCAGATGCCAATGCAGAAAATCTTAATAAAAAGGCAATGTCTACAAATTTTCCGGTTGTAGGTCATGATAGTATTTATCCAGTTAATGAAGCGATATTAGACAATGGCATCTTCTCTGGAACTAACACCGGCCATCTCTTGGATGCTGTCGTCTCAAAAACTCAACCTGCTTCAAATGAGAATTCCGACGAAATGTCTTGCAGGACCACAATAACAAGAATTAGTACCGCGTCTGTTCCTTCTACCGGCATTCAGATTATCCGCGATCATGTTGGCCAGGGGGCGCCGTTTGATTTTCCCCAAACAGAGATTAAAGTTAGTGCAGCGGAAACAACTTCTCTTAGGTCTGGTTGCAGCAAAGATAATGTCGGAAACTGTTCTCAAACCACTTCCATATATGGTTCTCAGCTTAGTTCATGGGTGGAAAACGGTAGCAGCAGCCATGTGAAACGTGAAAATAGTGTTTCAACTGGATACTCTAAGAGACCAGATGAAGTTAGCAAACCAAATCGTAAAAGGCTTAAACCTGGAGAGAACCCTAGGCCTCGACCTAAAGATCGTCAAATGATTCAAGATCGCGTGAAAGAGTTACGGGAAATCGTGCCTAATGGAGCAAAATGTAGCATTGACGCCCTTCTTGAAAGGACCATCAAACATATGCTTTTCTTGCAAAGTGTAACAAAGCATGCCGATAAGTTGAAACAGACAGGAGAATCCAAGATTCTTAGTAAAGAAGGTGGATTGTTATTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCGTACGAGGTTGGTTCCCAATCAATGGTTTGCCCTATCATAGTCGAGGATCTTAATCATCCCCGTCAGATGCTTGTCGAGATGCTTTGTGAGGAACGAGGCCTCTTTCTTGAAATAGCCGATTTAATCAAAGGCTTAGGGTTAACTATCCTGAAAGGGGTCATGGAAGCTCGCAATGACAAGATTTGGGCACGCTTTTCTGTCGAGGCAAACAGAGACGTAACAAGGATGGAAATATTCATGTCACTAGTTCGACTTTTGGAACAAACAGCGAAAGGAGGCGCATCTTCATCAAATGCTGCAGTTGATAATAACATGATGGTTTATCATTCGATCCCGCAATCCACCTAG 2688 0.42 MGFLLKETLKTLCARNQWSYAVFWKIGCNNSKLLIWEDCYYEPLPSRLLPQIAGTSNLPYRDREGCWFSSDSQLRIQEDDRVCSLINKMMVNNSVNVAGQGILGRAAFTGNHQWIVLNNFIKDAYPPEVLTELHCQFSAGMQTVAVIPVLPHGVVQLGSFLPIMENIGFVNDVKNLIFQLGHVPGALLSEDYSTRLSNERYSGPVTNCMPFSFDPQVVTSNCTPSVANSSNQPSISPHGPMHVAAQPPSFHNGSVLTPQSQNLNQILESLCQPKAQRENTTVKAEAEVISTNLDSSCLQQRSFSYNARSALGMEQQIFSDIGTQSHGNRNMNPSSSALNMSRRQTDGGQIYYQNSNNTSLLGGIPICSSGMSNNNLLRKNMINCSVSNPPKLSTTDFSGTQKVGFGIQNDNSTTAANQMHRKGSDQKNLPVDLKYAQNASASTDERIDDLLQALKIPSSHHLKEHVPMNDHIPGFLHDLELEEACTQLSSGDDDLFDVLGVDFKRNLLNGNWNTLFADESDANAENLNKKAMSTNFPVVGHDSIYPVNEAILDNGIFSGTNTGHLLDAVVSKTQPASNENSDEMSCRTTITRISTASVPSTGIQIIRDHVGQGAPFDFPQTEIKVSAAETTSLRSGCSKDNVGNCSQTTSIYGSQLSSWVENGSSSHVKRENSVSTGYSKRPDEVSKPNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKILSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNHPRQMLVEMLCEERGLFLEIADLIKGLGLTILKGVMEARNDKIWARFSVEANRDVTRMEIFMSLVRLLEQTAKGGASSSNAAVDNNMMVYHSIPQST* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4706 895 CDD bHLH_AtLHW_like 697 766 - -
Psa7g4706 895 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Psa7g4706 895 MobiDBLite consensus disorder prediction 663 682 - -
Psa7g4706 895 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 894 - -
Psa7g4706 895 MobiDBLite consensus disorder prediction 683 708 - -
Psa7g4706 895 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 894 IPR043561 GO:0003700|GO:0006355
Psa7g4706 895 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 693 742 IPR011598 GO:0046983
Psa7g4706 895 MobiDBLite consensus disorder prediction 663 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4706 Psa-Chr7 407355606 407361081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4706 482 876 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.852 1.96e-111 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4706 - - aprc:113857443 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g5997 5 515557210 515563009 Psa7g4706 7 407355606 407361081 PCT