Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4697 ATGGGAACGTACTTTCATGGAAGTAGCAACAGTTCTGACATCCAACCGTCGGCAGAAGGTATGCAGACACTTTACCTTATGAATCCAAACTACGTAGTACCGTACTCCGAGGAACCACAAAATCCAACACAAAACATGCTTTTCACTAATCCCAACGCTACCACAAACACTCCTCCTTCACCTCACGCGCTCAATGTATTCAAATTTCCCCACGCGCCTTCTTCGATGAGTCAACACAACATAGTTGGATTTACTGTTCCACCGTCGAACTTCCATGGATCCAACTCCACCGACAGTTCTACACAGCCGTACCAAGCTTCCGGCTTCCACGCCATCCCCTCCTCGGCGGCAGAAACTACTCATCCACCTCATCCCCAGTATAATACATGGGGATCAGGTAGTTTCATACTACCTGACCAAACTGTCACGGTGGCGACAACCTCTAACATATCAGAATCTCAGACCGTTGCCACCGTGACAACATCTGAAGCGACAGAATTTTCGCCGCCACAAATAGGTTATCATCATAGGCCAGTTTATCAGCGCGGTTTGTCTCTCAGTCTTTCCTCACAACAAACGCCTTACCGGTCATTTTCTGGCGAGGTTGAGGTCTCCCGCGGCGGTGACAACCACGGCGGTGTTGTTTTCGGGTCGAAGTACTTAAAAGTGGCACAAGAGCTTCTAGATGAAGTTGTGAATGTGGATAAGGGAATCATGAAAGGAGAATCTGTTGAAGGAAATAATACTAACAATAATGATAGAGAAAAGAGGAAAGCGAATATTGAATCGAGTTCGAGTGGTGGAAGAGAAAACGATGGAGGGAAACAAGTTGTTGAATTAAGCACTGCACAGAGACAAGAGCTTCAAATGAAGAAGTCAAAGCTTGTTAACATGCTAGATGAGGTAGAGCTAAGGTACAAACAATACCACCATCAAATGCAAAGTGTGATATCATCATTTGAATCCGCAACCGGATACGGAGCAGCAAAATCTTATACATCCCTTGCCTTGAAGACAATCTCAAAGCAATTTCGAAGTCTGAAAGACGCAATAACATCGCAAATCAAGACGACTAGCAAGAGTTTGGGAGAAGATGATTGCTTGGGAGTTAAGTTAGAAGGTTCTAGGCTAAGGTACGTCGATCATCATCTCCGACAACAACGGGCATTACAGCAACTTGGAATGATTCAGAATAATGCTTGGAGACCACAAAGAGGATTGCCCGAACGAGCTGTTTCTGTTCTTCGAGCTTGGCTTTTCGAGCATTTCTTGCACCCATATCCTAAGGACTCTGATAAGGTTATGCTTGCAAGACAAACTGGACTTACTCGGAGTCAGGTGTCTAACTGGTTTATAAACGCTCGAGTTCGGCTATGGAAACCAATGGTTGAAGAAATGTACATGGAAGAAATCAAGGAACAAGAGGAGAATAATGGATCCAAGGATAACACAAATACATCAAAAGAATCAAGAAAAGAGTTATGGTCTACAACTAATGCTACACAAGAATCAAGTGCTACTAAAATCGATCATATCACTGCGCTTAATTCAAAAACAGAAAACTTCAACAACCAAAACACTTCTCCAACTGATATTTCACATCCCAATAATTCAATCTCCTTATCACCATTGGATATGAAGTCTAACAGAGAATCCAACACAAAGTTTGAGTTTGAAAGGAATCATGACAAAAATGGTTACCCTTTAATGAATGAAAATGAAAACCATGGTGGTGGTTATGGATCAATATTCTCAATGGAAGATATTGGAAGGTATAATGTTAGTGAACAACTAGCTCCTAGATTTCATGGAAATGGTGTTTCTCTCACTCTTGGTCTACCACATAATGAAAATCTCCCTCTATCTTCAACTCAACATGGATTTCTCACTCATAGTATGCATATCGGAGGGAGGATTGAAATGAGAGAGAATGAAAATGAGTTTTGTGGCATTAACACTACTACTCCTTCTTCTCATTCAGGTACAAGTTATGAGAGTGTTGATATTCAAAACAAGAAAAGGTTTTCTACACAATTATTACGTAACTTTGTGAACTAA 2058 0.4164 MGTYFHGSSNSSDIQPSAEGMQTLYLMNPNYVVPYSEEPQNPTQNMLFTNPNATTNTPPSPHALNVFKFPHAPSSMSQHNIVGFTVPPSNFHGSNSTDSSTQPYQASGFHAIPSSAAETTHPPHPQYNTWGSGSFILPDQTVTVATTSNISESQTVATVTTSEATEFSPPQIGYHHRPVYQRGLSLSLSSQQTPYRSFSGEVEVSRGGDNHGGVVFGSKYLKVAQELLDEVVNVDKGIMKGESVEGNNTNNNDREKRKANIESSSSGGRENDGGKQVVELSTAQRQELQMKKSKLVNMLDEVELRYKQYHHQMQSVISSFESATGYGAAKSYTSLALKTISKQFRSLKDAITSQIKTTSKSLGEDDCLGVKLEGSRLRYVDHHLRQQRALQQLGMIQNNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEIKEQEENNGSKDNTNTSKESRKELWSTTNATQESSATKIDHITALNSKTENFNNQNTSPTDISHPNNSISLSPLDMKSNRESNTKFEFERNHDKNGYPLMNENENHGGGYGSIFSMEDIGRYNVSEQLAPRFHGNGVSLTLGLPHNENLPLSSTQHGFLTHSMHIGGRIEMRENENEFCGINTTTPSSHSGTSYESVDIQNKKRFSTQLLRNFVN* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4697 685 MobiDBLite consensus disorder prediction 521 544 - -
Psa7g4697 685 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 9 632 - -
Psa7g4697 685 SMART prehox3 211 353 IPR006563 -
Psa7g4697 685 CDD homeodomain 401 462 IPR001356 GO:0003677
Psa7g4697 685 Pfam Homeobox KN domain 418 457 IPR008422 GO:0003677|GO:0006355
Psa7g4697 685 SUPERFAMILY Homeodomain-like 402 468 IPR009057 -
Psa7g4697 685 Pfam Associated with HOX 214 352 IPR006563 -
Psa7g4697 685 MobiDBLite consensus disorder prediction 243 276 - -
Psa7g4697 685 MobiDBLite consensus disorder prediction 480 506 - -
Psa7g4697 685 Gene3D - 404 485 - -
Psa7g4697 685 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 9 632 - -
Psa7g4697 685 SMART HOX_1 401 465 IPR001356 GO:0003677
Psa7g4697 685 Coils Coil 285 305 - -
Psa7g4697 685 ProSiteProfiles 'Homeobox' domain profile. 398 461 IPR001356 GO:0003677
Psa7g4697 685 MobiDBLite consensus disorder prediction 472 506 - -
Psa7g4697 685 MobiDBLite consensus disorder prediction 249 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4697 Psa-Chr7 406270097 406287599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4697 1 684 Homeobox Transcription Factor Family AT2G35940 43.302 9.24e-136 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Psa7g4697 POX 2.6e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4697 - - mtr:MTR_4g051532 946.421